NP_611498.1 has 576 amino acids
Query: FAP206 [M=272] Accession: PF12018.12 Description: Domain of unknown function Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-70 223.9 5.5 1.2e-70 223.9 5.5 1.9 2 NP_611498.1 Domain annotation for each sequence (and alignments): >> NP_611498.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.7 0.1 0.079 0.079 2 34 .. 94 126 .. 93 137 .. 0.80 2 ! 223.9 5.5 1.2e-70 1.2e-70 1 271 [. 216 491 .. 216 492 .. 0.97 Alignments for each domain: == domain 1 score: -1.7 bits; conditional E-value: 0.079 FAP206 2 leealpatseaiekeleeaqelaykytallekl 34 le+ ++ +e++++el+ +++ + +y + k+ NP_611498.1 94 LEYVKKKYEEKFQTELQLLIKDILQYPETCSKV 126 666678889999999999999999999988887 PP == domain 2 score: 223.9 bits; conditional E-value: 1.2e-70 FAP206 1 ileealpatseaiekeleeaqelaykytallekl.....keetsksevseeqlerlkqalvnvrqyeaflkiLlsdvekcaqeveslqkrleaelekl 93 +le+a+++t++a+++++ +a ++ ++ a+l++l k+et ++v++e+l+rl+q+ +++ +++++l++L+++++k+ + +e+++kr+++++ k+ NP_611498.1 216 DLEMAQKNTEAAFAASMGRAVKMQSTCQAALDDLinidhKDETLTYRVPLEHLDRLNQFAATYFMLHRCLTTLNEHYQKTVYLIEVEHKRYQCVICKI 313 69************************888888888***9*********************************************************** PP FAP206 94 ketvksktavpteqVfPkFialsklWselqdelellsvlnnllesLepll...............eaqsklfpeevleslleevevktdeervnvsef 176 +t++++ta+++e +fP+F++ls++W +l+++l+++++ln+l+e++e+l+ +a++k++++ +++s++e++++ ++ NP_611498.1 314 DDTLSMRTAIDSELIFPHFVYLSQVWGNLNNYLNHIVELNKLREQVEALVvddlmtltkatiaelQALHKRIKKPKVCSFEERMDAVKEL-------- 403 *************************************************************************************99444........ PP FAP206 177 kevewlfPettanfdkl.pldynGfCaytlverdGLllPgnpsigvlkykdkyyaFsskeaaleFaedpdryiaavlekakknpeLiqLLeLhqqf 271 +t++nf+kl ++d+++fC ++++ ++GLl+P+++++++++++d++++F++ ++a+ ++ +++ +iaa+++++++n++L+ L++L++++ NP_611498.1 404 --------QTDGNFCKLnKADIKEFCSLAMTITNGLLMPAQVTRKLCSNVDITFGFRDPRYARFAELRFEPFIAAFRKVVFNNANLALLFKLDDAL 491 ........5************************************************************************************975 PP
Or compare NP_611498.1 to CDD or PaperBLAST