Align NP_653282.2 to PF13863 (DUF4200)

NP_653282.2 has 316 amino acids

Query:       DUF4200  [M=119]
Accession:   PF13863.11
Description: Domain of unknown function (DUF4200)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.6e-30   91.4  27.7    2.6e-30   91.4  27.7    3.2  3  NP_653282.2  


Domain annotation for each sequence (and alignments):
>> NP_653282.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.4  27.7   2.6e-30   2.6e-30       1     118 [.      44     161 ..      44     162 .. 0.99
   2 !    4.0   3.9    0.0034    0.0034      24      93 ..     184     225 ..     164     241 .. 0.55
   3 ?    0.5   0.8     0.042     0.042      17      39 ..     287     309 ..     264     315 .. 0.49

  Alignments for each domain:
  == domain 1  score: 91.4 bits;  conditional E-value: 2.6e-30
      DUF4200   1 llekkremflvqealdakkeeierleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeetkekkekekeikklkaeleelkseisk 98 
                  llekk+e + +++++ +kk+ ++r++e+l+ r+eel  ke++lk++++k ++f++en++kr ra+kka++e+++k + ++e+ k k+e+ +l+ e+++
  NP_653282.2  44 LLEKKKETEIMHQTMVQKKKMFQRRMETLNLRWEELGVKEAQLKAHIQKSEQFIQENDQKRIRAMKKANKERELKCQHMQELTKRKQEMVALRLEHQR 141
                  79************************************************************************************************ PP

      DUF4200  99 leekleeykkYekfLekvvp 118
                  l +kl++y +++k+Lekvv+
  NP_653282.2 142 LSAKLKDYYIFNKYLEKVVE 161
                  ******************98 PP

  == domain 2  score: 4.0 bits;  conditional E-value: 0.0034
      DUF4200  24 rleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeetkekkekekeikklkaeleelk 93 
                   l+++++e +e++e+++++l + +++                            k+ ei + ++el++l+
  NP_653282.2 184 DLMQSAQEGQEKIERAKARLARYMEE----------------------------KDDEILQQNNELARLQ 225
                  45555555555555555555555544............................4444444444444444 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.042
      DUF4200  17 akkeeierleellkereeelekk 39 
                  ++ + i++  ++ ++ ++e++kk
  NP_653282.2 287 KQLDMIQQFIQDRSDIWAEVKKK 309
                  22222333333333334444444 PP

Or compare NP_653282.2 to CDD or PaperBLAST