NP_724035.2 has 763 amino acids
Query: CCDC113_CCDC96_CC [M=177]
Accession: PF13870.11
Description: CCDC113/CCDC96, coiled-coil
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-48 151.5 27.8 1e-48 151.5 27.8 2.8 4 NP_724035.2
Domain annotation for each sequence (and alignments):
>> NP_724035.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.7 1.9 0.96 0.96 81 93 .. 50 62 .. 36 86 .. 0.40
2 ? -3.3 0.1 0.34 0.34 81 117 .. 291 327 .. 282 349 .. 0.48
3 ? -2.4 0.9 0.19 0.19 60 83 .. 484 507 .. 457 528 .. 0.54
4 ! 151.5 27.8 1e-48 1e-48 1 176 [. 551 726 .. 551 727 .. 0.99
Alignments for each domain:
== domain 1 score: -4.7 bits; conditional E-value: 0.96
CCDC113_CCDC96_CC 81 hlkeklhmlsekl 93
+ k+ ++++ +++
NP_724035.2 50 ESKDVTKEVLRQQ 62
1111111111111 PP
== domain 2 score: -3.3 bits; conditional E-value: 0.34
CCDC113_CCDC96_CC 81 hlkeklhmlsekleelkkelkerqeklaklrkelyev 117
+kek++ l + ++ +++ ++ ++l+ ++ ++++
NP_724035.2 291 LIKEKEKVLPAVKNDRDQKEPDSFADLQVEDEYTENL 327
5555555554444444444333333333333333333 PP
== domain 3 score: -2.4 bits; conditional E-value: 0.19
CCDC113_CCDC96_CC 60 ernkeLkrlkkkvtktvhalahlk 83
e ++ L++ +++ + +v+++++l
NP_724035.2 484 ELDNRLEQVQLTEKLSVKQVNTLI 507
222222333333333333333322 PP
== domain 4 score: 151.5 bits; conditional E-value: 1e-48
CCDC113_CCDC96_CC 1 mrakrnelsklrlelitlkhtlakiqeklekkeelgegLtlidFeqlqienqalsekieernkeLkrlkkkvtktvhalahlkeklhmlsek 92
m+++r+e s++r el+ +h+l+ +++k+ek+e+lg+gL++ +++++q+ n+al+ ki e++ eLkr +++ t++vhalahlk+k ++ +e
NP_724035.2 551 MNKTRDETSDVRKELLFVQHRLQALKNKSEKLENLGDGLRVLEYISNQARNNALRLKIKEKELELKRFRDRKTYDVHALAHLKNKKKINEEL 642
899***************************************************************************************** PP
CCDC113_CCDC96_CC 93 leelkkelkerqeklaklrkelyevklerdklrkqnkklkkqggllrvPaLleDYdktkeeveekrksvkkLrrkvkilekrik 176
l+++k++l+++q+ +++lr++ y+ ++++++k++ klk+ g+l+++P+Ll DYd+t++++++kr +v+kLr+++ +le+r++
NP_724035.2 643 LNNMKSKLRTQQKLEKDLRARHYREMVKHEWVKKKILKLKRAGCLMHYPDLLLDYDATVNHLQSKRLVVRKLRHEHLRLEERLS 726
**********************************************************************************98 PP
Or compare NP_724035.2 to CDD or PaperBLAST