PaperBLAST – Find papers about a protein or its homologs

 

Align O25673 to PF04074 (DUF386)

O25673 has 178 amino acids

Query:       DUF386  [M=145]
Accession:   PF04074.16
Description: YhcH/YjgK/YiaL
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.7e-23   69.4   0.2    2.3e-23   69.0   0.2    1.2  1  O25673    


Domain annotation for each sequence (and alignments):
>> O25673  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   69.0   0.2   2.3e-23   2.3e-23      33     143 ..      48     168 ..       2     170 .. 0.71

  Alignments for each domain:
  == domain 1  score: 69.0 bits;  conditional E-value: 2.3e-23
  DUF386  33 eeGkyeidgddlfanvqey...etkpkeeaklEvHrkyiDiqivlegeEtigyaelaekeelke.eydeekDiafyeedeeessvtlkpgefaiffPedaHrp 131
             +e ++++ g  +f + q+y   ++k++e+  +E+H+ky+D q++++g E  +   ++  +++ + +yde++D+++ye  +e+s+++l++g+ aiff +daH+ 
  O25673  48 TEFQVPL-GHGIFSIEQSYcleHAKESEKGFFESHKKYVDFQLIVKGVEGAKAVGIN--QAVIKnPYDEKRDLIVYEPVSEASFLRLHAGMLAIFFENDAHAL 147
             3333444.5555555555422256777888********************9555444..444445************************************** PP

  DUF386 132 .........egkekvrKvVvK 143
                        +e++ K+VvK
  O25673 148 rfygesfekYREEPIFKAVVK 168
             *******9966667******9 PP



Or compare O25673 to CDD or PaperBLAST