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Align O30012 to PF01817 (CM_2)

O30012 has 620 amino acids

Query:       CM_2  [M=79]
Accession:   PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-16   47.2   2.5    1.2e-16   47.2   2.5    2.8  3  O30012    


Domain annotation for each sequence (and alignments):
>> O30012  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.3   0.1      0.68      0.68      40      58 ..     124     143 ..     119     154 .. 0.70
   2 ?   -0.2   0.4     0.072     0.072      42      77 ..     213     247 ..     206     249 .. 0.70
   3 !   47.2   2.5   1.2e-16   1.2e-16       1      79 []     270     345 ..     270     345 .. 0.95

  Alignments for each domain:
  == domain 1  score: -3.3 bits;  conditional E-value: 0.68
    CM_2  40 eReeevlerlre.gaeelgl 58 
             e e+ +le+lr+ ga   +l
  O30012 124 EEEKVILEELRKcGAVLSRL 143
             56778888888876644444 PP

  == domain 2  score: -0.2 bits;  conditional E-value: 0.072
    CM_2  42 eeevlerlregaeelgldpeavekifreiisesral 77 
              ee l+r++e   e+  d+e  ++if+ + +   ++
  O30012 213 REEYLRRAMELH-EKMKDRESFREIFESLRKIYTDY 247
             567777777754.56678888999998887766655 PP

  == domain 3  score: 47.2 bits;  conditional E-value: 1.2e-16
    CM_2   1 RkeIdeiDrelleLlaeRmelakeiaeyKkenglpvldpeReeevlerlregaeelgldpeavekifreiisesralQk 79 
             R  I +iD+ +l+L+++R + a++ia++K e+g p+  ++ eee+l +++++     l+p  +++if+ i+s  ++ ++
  O30012 270 RGLIKSIDSLILRLIERRIDAARQIARIKMERGEPIELKDVEEEKLWEVMSKT---TLNPVKLKEIFEGIMSLAKEEEY 345
             66799**********************************************65...7****************999885 PP



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