PaperBLAST – Find papers about a protein or its homologs

 

Align O33285 to PF11248 (DUF3046)

O33285 has 277 amino acids

Query:       DUF3046  [M=62]
Accession:   PF11248.12
Description: Protein of unknown function (DUF3046)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-17   47.9   0.3    2.6e-16   46.1   0.2    2.1  2  O33285    


Domain annotation for each sequence (and alignments):
>> O33285  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.43      0.43      11      29 ..     128     146 ..     124     150 .. 0.69
   2 !   46.1   0.2   2.6e-16   2.6e-16      21      61 ..     228     268 ..     223     269 .. 0.93

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.43
  DUF3046  11 eeeFGsayaeslardhvls 29 
              ++ +G++ ++++a  + l+
   O33285 128 HQRLGRRSGNAIACPLYLE 146
              5678888888887666665 PP

  == domain 2  score: 46.1 bits;  conditional E-value: 2.6e-16
  DUF3046  21 slardhvlselggrTaeeAleaGvdprdVWralcdafdvPe 61 
              +   dhvl+++ggr a  A+e+Gv+pr  W+alc +fdvP+
   O33285 228 WCWLDHVLTGFGGRNAICAIEDGVEPRVAWWALCTDFDVPR 268
              66679***********************************8 PP



Or compare O33285 to CDD or PaperBLAST