PaperBLAST – Find papers about a protein or its homologs

 

Align P25637 to PF01205 (UPF0029)

P25637 has 258 amino acids

Query:       UPF0029  [M=107]
Accession:   PF01205.25
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-35  108.1   0.2    1.8e-35  107.5   0.2    1.3  1  P25637    


Domain annotation for each sequence (and alignments):
>> P25637  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.5   0.2   1.8e-35   1.8e-35       1     107 []     144     251 ..     144     251 .. 0.90

  Alignments for each domain:
  == domain 1  score: 107.5 bits;  conditional E-value: 1.8e-35
              TTEEEEEEEEE-SSHHHHHHHHHHH--..TT..SSEEEEEEE...ET.T.E.EEEE-TTSSTTSSHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHHHHH CS
  UPF0029   1 kkSkFiahaapveseeeakelleelkkehkk..AtHnvyAyrieeee.d.eierssDdgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvra 98 
              ++S+F+a+aa+v+see+a ++l+ lk++ k   A+H+++A+ri+++    + ++s+DdgE++  AG+++l++++ ++++nv+vvv R+fGG ++G++++ ++
   P25637 144 RGSTFMAFAAHVTSEEQAFAMLDLLKTDSKMrkANHVMSAWRIKQDGsAaTYQDSDDDGETA--AGSRMLHLITIMDVWNVIVVVARWFGGAHIGPDRF-KH 242
              68********************97776544366**********84443347799********..***********************************.** PP

              HHHHHHHHH CS
  UPF0029  99 yskaakeal 107
              ++++a+ea+
   P25637 243 INSTAREAV 251
              ******986 PP



Or compare P25637 to CDD or PaperBLAST