PaperBLAST – Find papers about a protein or its homologs

 

Align P27862 to PF09186 (DUF1949)

P27862 has 204 amino acids

Query:       DUF1949  [M=56]
Accession:   PF09186.15
Description: Domain of unknown function (DUF1949)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.2e-19   54.6   0.0    8.4e-19   53.6   0.0    1.5  1  P27862    


Domain annotation for each sequence (and alignments):
>> P27862  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.6   0.0   8.4e-19   8.4e-19       1      55 [.     141     195 ..     141     196 .. 0.98

  Alignments for each domain:
  == domain 1  score: 53.6 bits;  conditional E-value: 8.4e-19
  DUF1949   1 ltcdYaqlgklqrlLeqfgatildeeYtddVtltvevpeeeveafkqaLteltsG 55 
              l+c+Y ql  +++lL+q +++i +++Y++ V l+v++p+++v++f+++L+++++G
   P27862 141 LQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRG 195
              79****************************************************9 PP



Or compare P27862 to CDD or PaperBLAST