PaperBLAST – Find papers about a protein or its homologs

 

Align P44116 to PF04480 (DUF559)

P44116 has 157 amino acids

Query:       DUF559  [M=109]
Accession:   PF04480.16
Description: Protein of unknown function (DUF559)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-52  161.5   1.7    3.5e-52  161.2   1.7    1.1  1  P44116    


Domain annotation for each sequence (and alignments):
>> P44116  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  161.2   1.7   3.5e-52   3.5e-52       2     108 ..      27     133 ..      26     134 .. 0.98

  Alignments for each domain:
  == domain 1  score: 161.2 bits;  conditional E-value: 3.5e-52
  DUF559   2 klkanarklRreqteaekkLWrllrnrrlsglkfrRqkpigsYivDfvclkaklivelDGaqhdeeeeyDaeRtelLeslGftvlRfkndevlknieevleei 104
             +l+++a++lRr++t+ae++LW++lrn+ ++g++f+Rq++ig+YivDf+++k kl++elDG+qh e+e+yD eRt++L+++G++v+Rf+ndevlkni++vle+i
  P44116  27 RLAQYATELRRNMTDAEYALWYHLRNKLFCGIRFNRQVIIGHYIVDFCSRKLKLVIELDGIQHVEQEQYDLERTKFLTAQGYKVIRFWNDEVLKNIDNVLEAI 129
             6889*************************************************************************************************** PP

  DUF559 105 lkal 108
             + ++
  P44116 130 YVEI 133
             *987 PP



Or compare P44116 to CDD or PaperBLAST