PaperBLAST – Find papers about a protein or its homologs

 

Align P76169 to PF02694 (UPF0060)

P76169 has 108 amino acids

Query:       UPF0060  [M=107]
Accession:   PF02694.21
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.5e-53  164.3  11.8    4.9e-53  164.2  11.8    1.0  1  P76169    


Domain annotation for each sequence (and alignments):
>> P76169  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  164.2  11.8   4.9e-53   4.9e-53       1     106 [.       1     107 [.       1     108 [] 0.98

  Alignments for each domain:
  == domain 1  score: 164.2 bits;  conditional E-value: 4.9e-53
  UPF0060   1 vlrsillfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqpaafGrvyaayGGvfvvlallwglvvdgvkldlydwiGalialvGvlvil 102
              +++++llf+++al+ei+G++l+wlwl++++s++l+l+a+i+la++++l+tl+paa+GrvyaayGGv+v++al+w++vvdgvkl+lydw+Galial+G+l+i+
   P76169   1 MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIV 102
              89**************************************************************************************************** PP

  UPF0060 103 yap.r 106
              +++ r
   P76169 103 AGWgR 107
              *9966 PP



Or compare P76169 to CDD or PaperBLAST