Q08977 has 551 amino acids
Query: DUF2408 [M=130]
Accession: PF10303.13
Description: Protein of unknown function (DUF2408)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-67 211.6 26.8 1.2e-48 151.2 4.7 5.2 5 Q08977
Domain annotation for each sequence (and alignments):
>> Q08977
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 11.9 2.4 1.4e-05 1.4e-05 4 120 .. 13 130 .. 11 134 .. 0.77
2 ! 3.3 1.2 0.0064 0.0064 14 82 .. 119 199 .. 108 208 .. 0.49
3 ! 151.2 4.7 1.2e-48 1.2e-48 1 130 [] 209 372 .. 209 372 .. 0.98
4 ! 31.9 0.1 9.5e-12 9.5e-12 39 119 .. 376 448 .. 373 450 .. 0.89
5 ! 40.2 0.0 2.5e-14 2.5e-14 4 97 .. 428 517 .. 425 525 .. 0.90
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 1.4e-05
DUF2408 4 lspelepiyekLvsirrsllslatrskke.sk...keelkelkkeLkeieskrde..egkfassetkevvekgqavlngLlddCldlvedlkakkeseekkl 99
+++e e+i++ L+++r sl++l + ++ ++ +++ +++ ++++e+++ r++ e +s t ++ + + +++ ldd ++l++ + l
Q08977 13 VPKEEESILNYLLEVRSSLAKLKQNRTQYlNSkdvQTTYQHVLTKVRELDDIRKNshETPAKSAATLIHSTELHNRVDSVLDDVFQLLSLCFLT-----VGL 109
78999*****************999988854455655666666666666666665322333334444477788999***********9998888.....579 PP
DUF2408 100 dpklqpiYekLleikttLenL 120
+++ ++Y +L+++ + Le+L
Q08977 110 KNSAPATYASLSTVESLLEHL 130
9999999*****999999998 PP
== domain 2 score: 3.3 bits; conditional E-value: 0.0064
DUF2408 14 kLvsirrsllslatrskkeskkeelkelkkeLkeieskrde............egkfassetke..vvekgqavlngLlddCl 82
L ++ l l+ ++ ++ +++l+ +k++L+ei + ++ ++++ + ++++ + +++ +l+ l+ C
Q08977 119 SLSTVESLLEHLNESNVFT--HHDLSPIKERLEEISKIVEQknsspaydedgnDDRLREIDNERkkNKIEEDLLLRAKLKHCK 199
5555555555555555555..67777777777777654444333444444443333333222111133333445555555555 PP
== domain 3 score: 151.2 bits; conditional E-value: 1.2e-48
DUF2408 1 leelspelepiyekLvsirrsllslatrskke.sk..................................keelkelkkeLkeieskrdeegkfassetkevv 67
lee++p+l+ ++ekL+ irr+llsl++++kk+ sk +e+l+ lk+eL+e+es+rd++gkf+s e+++v+
Q08977 209 LEEIDPSLSTVMEKLFRIRRGLLSLVASAKKTmSKsdintnsllqeqndlqtnnesltddkhlvsqeyvHEKLSVLKNELSELESNRDDSGKFKSLESHQVA 310
799****************************96669****************************************************************** PP
DUF2408 68 ekgqavlngLlddCldlvedlkakkeseekkldpklqpiYekLleikttLenLllTrrWtLRE 130
ekgq+vlngLlddC+dlv+dl+++k++ +ldp lqpiYe+L++ikttLenL++TrrWtLRE
Q08977 311 EKGQSVLNGLLDDCHDLVNDLSHQKNGG-LTLDPYLQPIYEQLIDIKTTLENLMITRRWTLRE 372
************************9888.9********************************9 PP
== domain 4 score: 31.9 bits; conditional E-value: 9.5e-12
DUF2408 39 kelkkeLkeieskrdeegkfassetkevvekgqavlngLlddCldlvedlkakkeseekkldpklqpiYekLleikttLen 119
+++k+L+ei++kr + gkf +++ +++kgq++l Ll++C ++ +l ++ ++ ++++lqpi ++L++++ L +
Q08977 376 FSYQKKLNEIDNKRIN-GKFPTKS---QDSKGQSILLYLLRRCYAIIYKLLES----SEPVSEALQPIHNQLSTVRRCLLE 448
5799***********9.***5555...69***********************9....579***************998755 PP
== domain 5 score: 40.2 bits; conditional E-value: 2.5e-14
DUF2408 4 lspelepiyekLvsirrsllslatrskkeskkeelkelkkeLkeieskrdeegkfassetkevvekgqavlngLlddCldlvedlkakkeseek 97
+s+ l+pi+++L ++rr ll+l + ++ el ++ +L +++ r e g f +s++ ++gq +ln Ll++C+d++++lk + e++++
Q08977 428 VSEALQPIHNQLSTVRRCLLELKRMGGVN-NERELYPYQMKLASLDNLRTE-GIFYDSDG--NIPEGQGILNALLAECFDILHELKVEAEEKAQ 517
7899******************9999987.79******************9.***99999..899*********************99765433 PP
Or compare Q08977 to CDD or PaperBLAST