PaperBLAST – Find papers about a protein or its homologs

 

Align Q2FVS2 to PF05656 (DUF805)

Q2FVS2 has 215 amino acids

Query:       DUF805  [M=107]
Accession:   PF05656.18
Description: Protein of unknown function (DUF805)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-23   69.6  16.7      8e-22   64.0  16.7    2.4  1  Q2FVS2    


Domain annotation for each sequence (and alignments):
>> Q2FVS2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.0  16.7     8e-22     8e-22       1     107 []      20     180 ..      20     180 .. 0.71

  Alignments for each domain:
  == domain 1  score: 64.0 bits;  conditional E-value: 8e-22
  DUF805   1 yfsfsGRarRkeywwfvlvlvlvlivlllllallgas...................allgsalalllalllllpsllavtvRRlHDigrsgw........... 73 
             y++f+GR+rR+eyw+++l+++++++ ++++l +  +                     +l+s  +++++l++++p+ la++vRR+HDi r+ +           
  Q2FVS2  20 YVNFKGRSRRSEYWYMALWHLILMVPAVCVLIINLFLffisiaadnetlivmsilmIILTSVYTFVYSLATFIPN-LALCVRRFHDISRTMLfpmimtvfsii 121
             89************8888888777765555554444466779999999999999998899999999999999999.****************55555444433 PP

  DUF805  74 ..wlllllip...........................li...glivllvllllpgtpgenrYGpdp 107
               +      +                           ++    +iv++v+l+ +++p +n+YG++p
  Q2FVS2 122 fyI------VlqiidsyydsdftlmpmglnillvllyFVylgLTIVMIVFLCFDSKP-ANKYGESP 180
             330......033333444444444445555554444422334669999*****9877.9****998 PP



Or compare Q2FVS2 to CDD or PaperBLAST