Q540I8 has 250 amino acids
Query: SIMPL [M=205]
Accession: PF04402.18
Description: Protein of unknown function (DUF541)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.5e-59 185.5 2.2 8.7e-59 185.3 2.2 1.0 1 Q540I8
Domain annotation for each sequence (and alignments):
>> Q540I8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.3 2.2 8.7e-59 8.7e-59 1 205 [] 40 247 .. 40 247 .. 0.93
Alignments for each domain:
== domain 1 score: 185.3 bits; conditional E-value: 8.7e-59
SIMPL 1 itVtGeaevevapDlatvtlgvetegkdaaeaqaevaervnavlaalkaaagieekdiqtsglsvspeydy.....kngkrkitgyrasqsltvtvrdldklg 98
i VtGe+ +++ pD+a+++l+v ++k+a+ea+++++e++++vl+a+k+a gie++d+qt+g++++p y y + ++++itgy++s+sltv+vr+l+++g
Q540I8 40 IAVTGEGMMTASPDMAILNLSVLRQAKTAREAMTANNEAMTKVLDAMKKA-GIEDRDLQTGGINIQPIYVYpddknNLKEPTITGYSVSTSLTVRVRELANVG 141
78**********************************************65.***********************99999************************ PP
SIMPL 99 elldalveaganridgvsfslsdedelreearkeAvkdArakAealAkalgvklgrvvsisesgasgapppppaamaaaaaa.aaaaaaatpiepgeitvsas 200
++ld+ v+ g+n+ + +++ +++++ +eark+Av++A akA++lA+a+gv lgrvv+ise + p+p+p a+++ + + aaa + ++pi++ge + ++s
Q540I8 142 KILDESVTLGVNQGGDLNLVNDNPSAVINEARKRAVANAIAKAKTLADAAGVGLGRVVEISELSR--PPMPMPIARGQFRTMlAAAPDNSVPIAAGENSYNVS 242
************999999988899**************************************433..33444444444444499******************* PP
SIMPL 201 Vtvtf 205
V+v+f
Q540I8 243 VNVVF 247
***99 PP
Or compare Q540I8 to CDD or PaperBLAST