PaperBLAST – Find papers about a protein or its homologs

 

Align Q54824 to PF06722 (EryCIII-like_C)

Q54824 has 431 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-48  150.2   0.3    3.8e-48  149.3   0.3    1.4  1  Q54824    


Domain annotation for each sequence (and alignments):
>> Q54824  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.3   0.3   3.8e-48   3.8e-48       2     145 .]     272     417 ..     271     417 .. 0.95

  Alignments for each domain:
  == domain 1  score: 149.3 bits;  conditional E-value: 3.8e-48
                     TTHHHHHTSSSEEEE---TTTTSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE-- CS
  EryCIII-like_C   2 elldelgevDaeivvtldararedlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialp 96 
                     ell++++e+Dae+v+t++a++re+l  lP+nvR+vd + l+v+Lp+caa+vhhGGaG+++ta+ +GvPq+ l+ ++D + ra ++ +lGaGi lp
          Q54824 272 ELLASIAELDAEVVATVKAEEREGLPPLPGNVRVVDSLSLHVVLPSCAAVVHHGGAGTWATAALHGVPQLALAWQWDDVFRAGQLEKLGAGIFLP 366
                     689******************************************************************************************99 PP

                     TTT..--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHHH CS
  EryCIII-like_C  97 kde..ldadslaeavarvledpayreaaaklaeealaePkPtevvkklvel 145
                     +++    a +++  +a+vl +p++r++aa++++e+l  P+P  vv++l++l
          Q54824 367 PHGegASAGRVRDRLAQVLAEPSFRQGAARIRAEMLRTPAPGAVVPTLEQL 417
                     8761156679*************************************9986 PP



Or compare Q54824 to CDD or PaperBLAST