Q54R54 has 746 amino acids
Query: Fy-3 [M=498]
Accession: PF10154.14
Description: Ferry endosomal RAB5 effector complex subunit 3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-132 428.3 42.1 4e-125 404.6 19.0 3.0 2 Q54R54
Domain annotation for each sequence (and alignments):
>> Q54R54
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.6 18.0 3.3e-10 3.3e-10 6 212 .. 38 269 .. 33 272 .. 0.67
2 ! 404.6 19.0 4e-125 4e-125 18 497 .. 269 739 .. 266 740 .. 0.92
Alignments for each domain:
== domain 1 score: 25.6 bits; conditional E-value: 3.3e-10
Fy-3 6 rliaeeklPifvekdlkeelkkfveketlklydeka....................eqaleklredsvdvdsiakewekalkeelleyaekeea......... 79
+ ++e ++P++ + l +++++ +++ ++ +d+++ + ++ ++++++ + +
Q54R54 38 QFMNEYDIPCYFRISLLNTIENLIKQDKILTKDNDDieiilnikdgeiifdhnentN-------------------TNTNINNNCYISTSTIINqlsnqysek 121
677888888888888888888888888888888887444444444433333332211...................222222222111111111233333334 PP
Fy-3 80 .................saeekfa.tvyhklihspaletllqlektyakavkelvsernkelkklsekqteemekaiqelekeltdedvnelaakhfeeqqll 164
++ee+++ + y +s+ e +++ e+ +a++ + l+ +++ lk+l+ek+ +eme a ++l +++v ++a+++++ +
Q54R54 122 iqywnklagskeseeqkQQEERIStFLYLVDKNSDTRERIINQEELFATETSILLVKKQDDLKQLNEKHSREMEDAFR---NSLQPDQVELIVAQNMKQVDEF 221
44444444445555555555554413455555889*****************************************99...89******************** PP
Fy-3 165 ekkwnseleslkeeQkkeyrewvmklveelkspknksegseiknlsss 212
+ +++e++ lk++Qk e+ +++ l+ +k+ ++ e ++ + ++++
Q54R54 222 DQYYDHEINILKQKQKFEFSKFLNDLYWLEKTKDDLDEIESFNSQQQQ 269
*************************99877754444444443333333 PP
== domain 2 score: 404.6 bits; conditional E-value: 4e-125
Fy-3 18 ekdlkeelkkfveketlklydekaeqaleklredsvdv.dsiakewekalkeelleyaekeeasaeekfatvyhklihs.paletllqlektyakavkelvse 118
+++++++++++++k+++++++++++q++++++++s + dsi+++++k ++ +a+++f++ ++k++++ p++++++++++ +++++++++++
Q54R54 269 QQQQQQQQQQTPQKQQPPPPQQTPQQSQQSQPQSSGGIiDSIGQNLDKGVA------------RASSFFSFGFNKKNNQtPPINSPPSTPQLSSDDPNNVNNN 359
5778899*****************************999***********9............789************************************9 PP
Fy-3 119 rnkelkklse.kqteemekaiqel.......ekeltdedvnelaakhfeeqql............lekkwnseleslkeeQkkeyrewvmklveelkspknks 201
+n++++++++ ++t+++++ i+++ ++++td++v+ +++ +++++++ +++++n+++++++++Q+k+ s
Q54R54 360 SNNNNNNNNNnNNTQSKPIGINNNnnnnssnNRQRTDSQVSPPNSLNSSSPNKppqpttplnnnnSNNNNNNNNNNNNSIQRKS------------------S 444
998877766548999*******99999***99********************98887776444444444444444444444444..................7 PP
Fy-3 202 egseiknlssslqdkesaeeelipedns.....leEsFTIhlGsQlKtmhNirllsadvldlcrleeegs...kksqrlqtalsLYSssLsglvLlvdnklns 296
+gs+++nl+++lq+k+s+ + +ip+ ns ++E+FTI +G+Q+K+++N++l+++++l+lcr+ ++ + kks+r++++++LYS+sLs+++L++d++l++
Q54R54 445 TGSSSTNLQPTLQRKQSGGAGNIPIINSgssssKFEDFTIGVGVQKKKIFNFKLIEESPLQLCRPITSLTgdyKKSKRVDYIKTLYSDSLSAVILIIDPSLQF 547
89999************************************************************44444567****************************** PP
Fy-3 297 ysgikkdFakiceestefHFesideQlekikeslreaeerrkekaegkeessakaasresknsktlsaGdfYiTrHSNLsevhvvFHlvvdd....slks.se 394
+++++k+F+k+c++ste+HF+sid+Q++++k+sl+++eer+ke+ +++++n+++ls+Gdf+iT+HSNLs+v+vvFHlv+d+ +l + ++
Q54R54 548 NTENEKKFIKYCNMSTELHFDSIDSQIHTFKQSLLKEEEREKEE------------NNNNNNNIKLSNGDFFITKHSNLSDVQVVFHLVIDSknrtPLGGdNQ 638
*****************************************999............7888888*****************************999889999** PP
Fy-3 395 insrhpvilGLRniLkvaasydittitiPllLth.elseemTiswclkRaelvfkcvkgfmiemaslggaelktvqfllPsgisee..vFktlaemlpqiFrv 494
+++++++++GLRniL +a++y+i++itiP++Lt+ el+ ++T+s++l+R+++v++++++++++++++ +++ktvqf+lPs++++ +Fk ++++q++++
Q54R54 639 LSTTSDIAKGLRNILLTASKYGIGNITIPICLTEsELDLNVTNSNLLSRCVSVLSVTRASLTSLQEM--TSIKTVQFSLPSQLDSGntIFK---GPIAQKWKS 736
*********************************99******************************99..9**************9867888...********9 PP
Fy-3 495 anp 497
a++
Q54R54 737 AIN 739
976 PP
Or compare Q54R54 to CDD or PaperBLAST