PaperBLAST – Find papers about a protein or its homologs

 

Align Q6AXA1 to PF10239 (DUF2465)

Q6AXA1 has 385 amino acids

Query:       DUF2465  [M=302]
Accession:   PF10239.13
Description: Protein of unknown function (DUF2465)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      4e-98  314.5   0.2    4.7e-98  314.3   0.2    1.0  1  Q6AXA1    


Domain annotation for each sequence (and alignments):
>> Q6AXA1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  314.3   0.2   4.7e-98   4.7e-98       3     302 .]      73     368 ..      71     368 .. 0.98

  Alignments for each domain:
  == domain 1  score: 314.3 bits;  conditional E-value: 4.7e-98
  DUF2465   3 skaleeglsspeftelvawLaselkkllkleesvnsisseddaesfllelsslLkelgcpykalvsgeveerlkekedrlkLleyLvsElqAarileskkpe 104
               +++e g++s++ft+l+ wL selk++ ++ e+++++++++dae+f+le+s++ +el+cpy+al++g+v++rl++ +++l+Ll +L++ElqAari++++  +
   Q6AXA1  73 VHSAELGAASQHFTSLCVWLVSELKVVSSMVENISPTEGPEDAETFQLEMSGVVNELHCPYTALTTGDVTCRLTNLDNCLQLLVFLSTELQAARIISNR--K 172
              567899*********************************************************************************************..6 PP

  DUF2465 105 ekkkekskkesetakelkeilktLglskppknitakqlfskiekkvkellkkvpeklvgkpllkksltseqwekLekinkeLseeYelRrqmLlkRldvTvq 206
               +++ ++  ++e+++elk++ ++ g+++    + a++ ++ ++ k+ e+   vp+ +   pllk++l+++qwekL +++ +L +eYe+R +mL++R+dvTvq
   Q6AXA1 173 VPAMGSEGGSTEAVEELKQVGEAVGMPEHLLAVPAAEYMRMLQIKIAEITDAVPDFSRTAPLLKTELQPSQWEKLADLHWQLLREYECRMRMLVTRCDVTVQ 274
              78999999999******************************************************************************************* PP

  DUF2465 207 SFkWsdrakkkedeiakvyqpkrkeLekesdvslahlLaAredlakiektssasvrkktksainkvli.GrVPDRGGrpseqeapppeMPswqkrqe 302
              SF Ws+rak+   ++++vy p+r++L++e+++++ahlLaAre+ ++i  t+sa  r++t+s++nkvl+ G+VPDRGGrp+e+e+p   MP+w kr+e
   Q6AXA1 275 SFYWSERAKELGAAMKEVYWPLRQSLKTETRITMAHLLAAREEDSRILHTCSAVFRQNTQSSVNKVLMaGNVPDRGGRPNEIEPP---MPTWTKRRE 368
              ******************************************************************998****************...*******96 PP



Or compare Q6AXA1 to CDD or PaperBLAST