Q78HU3 has 271 amino acids
Query: DUF2464 [M=253]
Accession: PF10240.13
Description: Multivesicular body subunit 12
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-72 227.7 0.0 1.1e-71 227.5 0.0 1.0 1 Q78HU3
Domain annotation for each sequence (and alignments):
>> Q78HU3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 227.5 0.0 1.1e-71 1.1e-71 2 253 .] 9 259 .. 8 259 .. 0.95
Alignments for each domain:
== domain 1 score: 227.5 bits; conditional E-value: 1.1e-71
DUF2464 2 PitavaivedlnkcPkgytvisrtydgsdAdlwkdslfkskstrYLClsks...eglpeyVvedlkvisekdplPegyslisetlDskekalrKkrlcvkls 100
P++++ + ++++ P+g+++i+ t++g A + ++ f++k +++LCls+ e+ +++Vv+d++++ +k plP+g+s++++ D k+++++Kkr+cvkl+
Q78HU3 9 PLAGLVWSSASAPPPPGFSAITCTVEGGTASFGRG--FAQKAGYFLCLSTLgipENPQDNVVVDMQIVMDKGPLPSGFSAVNDPQDIKASVSKKKRMCVKLM 108
99*********************************..***************************************************************** PP
DUF2464 101 prgsaetAvtDiillskskkapegytlvGeingllvcykkgaiskskpqakprsvslelkslsleespsrpapkeplsksstarrstlra.kksdseaesst 201
p g+a+ v+D++l++k+k++p gy vG+i+g+++++kk++ ++p +kpr++s +++ lsl+ ++ ++ ++p+++ s + +s+ ++ +++ds +e+s+
Q78HU3 109 PLGTADVVVSDVKLSGKTKTVP-GYLRVGDIGGFAIWCKKSKA--PRPVPKPRTLSQDMRGLSLDPPKEPSKGSHPERTLS-RLGSRASTlRRTDSIYEASS 206
**********************.******************99..77799**************87776666666777666.66677777788********* PP
DUF2464 202 lygisaldGVpFvlnpkfekskkss.qssqlpdikikslaeiekeynYdFave 253
lygisa+dGVpF+l+p+fe ++ + + s++ d++iksla+iekeynY F ve
Q78HU3 207 LYGISAMDGVPFTLHPRFEGKSCGPlNLSAFGDLTIKSLADIEKEYNYGFVVE 259
**********************999899**********************998 PP
Or compare Q78HU3 to CDD or PaperBLAST