PaperBLAST – Find papers about a protein or its homologs

 

Align Q86UW6 to PF08590 (DUF1771)

Q86UW6 has 1770 amino acids

Query:       DUF1771  [M=64]
Accession:   PF08590.14
Description: Domain of unknown function (DUF1771)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-21   63.1   6.0    2.5e-21   62.1   6.0    1.6  1  Q86UW6    


Domain annotation for each sequence (and alignments):
>> Q86UW6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   6.0   2.5e-21   2.5e-21       1      64 []    1619    1682 ..    1619    1682 .. 0.99

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 2.5e-21
  DUF1771    1 YerlRaeArkharkrnelfqkAaeAykrGdgaaAkelseeGkehgekaeeanrqAaeaIfeerN 64  
               Y+++RaeA  h++kr e+++kA+eAy+ G++  A  ++++G  h +k++ean+ Aa +Ife+ N
   Q86UW6 1619 YDDYRAEAFLHQQKRMECYSKAKEAYRIGKKNVATFYAQQGTLHEQKMKEANHLAAIEIFEKVN 1682
               9************************************************************987 PP



Or compare Q86UW6 to CDD or PaperBLAST