PaperBLAST – Find papers about a protein or its homologs

 

Align Q8BGH1 to PF04782 (DUF632)

Q8BGH1 has 642 amino acids

Query:       DUF632  [M=317]
Accession:   PF04782.16
Description: Protein of unknown function (DUF632)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-95  305.6   8.5    2.2e-95  305.6   8.5    1.9  3  Q8BGH1    


Domain annotation for each sequence (and alignments):
>> Q8BGH1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.3   0.1      0.12      0.12      52      80 ..      80     113 ..      29     123 .. 0.48
   2 !  305.6   8.5   2.2e-95   2.2e-95       1     316 [.     180     517 ..     180     518 .. 0.86
   3 ?   -3.8   0.2      0.33      0.33      69      69 ..     582     582 ..     543     610 .. 0.44

  Alignments for each domain:
  == domain 1  score: -2.3 bits;  conditional E-value: 0.12
  DUF632  52 kvlkvlswsrssssr......ssskdskdesssee 80 
              +   ++ ++s+s +      +s+++++d++++ e
  Q8BGH1  80 PSHFFITFHSSNSAPppqipaTSEEEEEDDEEE-E 113
             222234444444333666654222222222222.2 PP

  == domain 2  score: 305.6 bits;  conditional E-value: 2.2e-95
  DUF632   1 llevvkeieelFlkAsesgkeVsklLEasklqyhsslkekkksvyk.......eessakvlkvls.wsrssssr..............ssskdskdessse.. 79 
             lle++k++e++Fl+A+esg eVsk+LE++k+  h ++++ k ++++       +   ++  + ls +srs+ss+              ss ++s+++++++  
  Q8BGH1 180 LLEALKDVEDHFLRACESGMEVSKMLEVEKIPSHPTFEDIKDNASRkrsvssrS---SSCKSLLSsSSRSTSSTwaesgadrrsllscSSDTSSTWTENKSea 279
             789****************************9*****99998777777664331...2222222212233333378888888999988555555555555557 PP

  DUF632  80 ..eeetmksgshsstLdkLyawEkKLYdeVKaeeklrieyekkckqLrkleekgaeaskidktraavkklesrirvaiqsvdsiskrIekLRDeeLqpqLveL 180
                +++m sgsh  tL +LyawEkKLY+eVKa++++r++y++kc+qL++ +  g++     k+ ++v++l+  + v++q+++sisk+IekLRDeeLqpqL eL
  Q8BGH1 280 ldGHSGMVSGSHFFTLGRLYAWEKKLYHEVKAGQQTRKTYKQKCSQLQQKDVDGDDL-CPSKASSEVTDLYHVMLVSLQRAESISKQIEKLRDEELQPQLFEL 381
             7799*********************************************99988775.668999*************************************** PP

  DUF632 181 iqglarmWksmlecHqvQlqiiqeaksldsskisketseshrqatlqLeaelsnWhssFsklikaqksYveaLngWLkkcllpeeekskeeseetpdels... 280
             ++gl r+W+smle H++Q +i++e++s+++ +  k++s+shr at+qLea +++Wh +Fs++++aqk Y ++L +WL+k++   e + ++ s+      +   
  Q8BGH1 382 LHGLLRTWNSMLETHDIQRKIMREINSFSCPEHGKFCSDSHRLATIQLEAVIQDWHYCFSDYVSAQKTYAKSLLSWLSKFI-DAEAEYHYTSSFSL---Ppir 480
             ********************************************************************************9.34444333333222...1344 PP

  DUF632 281 .gappifvlceeWsqaldrlpekevseaiksfaavvh 316
              + p + v+c++Ws++++rlp+k v+ a+ks+a++++
  Q8BGH1 481 fNGPTLIVTCQRWSTSMERLPDKSVKYAMKSLAKDLQ 517
             67*******************************9986 PP

  == domain 3  score: -3.8 bits;  conditional E-value: 0.33
  DUF632  69 s 69 
              
  Q8BGH1 582 F 582
             1 PP



Or compare Q8BGH1 to CDD or PaperBLAST