Q8CDN8 has 563 amino acids
Query: DUF4200 [M=119]
Accession: PF13863.11
Description: Domain of unknown function (DUF4200)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-29 88.6 14.4 2e-29 88.6 14.4 4.7 5 Q8CDN8
Domain annotation for each sequence (and alignments):
>> Q8CDN8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.4 0.7 0.33 0.33 23 38 .. 43 58 .. 36 69 .. 0.45
2 ! 88.6 14.4 2e-29 2e-29 1 119 [] 112 230 .. 112 230 .. 0.99
3 ? 0.5 9.3 0.042 0.042 6 72 .. 340 406 .. 335 414 .. 0.83
4 ! 2.7 2.0 0.0083 0.0083 25 66 .. 393 434 .. 389 442 .. 0.85
5 ? 0.8 8.5 0.033 0.033 59 92 .. 478 512 .. 453 530 .. 0.48
Alignments for each domain:
== domain 1 score: -2.4 bits; conditional E-value: 0.33
DUF4200 23 erleellkereeelek 38
+r++e++k++ ++++
Q8CDN8 43 ARKKERMKNHSMKIYQ 58
2333333333333333 PP
== domain 2 score: 88.6 bits; conditional E-value: 2e-29
DUF4200 1 llekkremflvqealdakkeeierleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeetkekkekekeikklkaeleelkseiskleek 102
+++ +r+ fl++++ +kk+ i+r e+l++ +e++l+k+e++l++d+ f++fl+en++++++a+k a++et +k ++++e+kk++ e++++ks+i+k+e
Q8CDN8 112 FINDQRDRFLLEYTVSTKKKTIKRFERLIAIKENQLKKAEKKLQDDALSFEEFLRENDQRSVDALKMAAQETINKLQMTSELKKASMEVQSIKSDIAKTEFL 213
7999************************************************************************************************** PP
DUF4200 103 leeykkYekfLekvvpk 119
l+ey+kY fL k++pk
Q8CDN8 214 LKEYMKYGFFLLKLSPK 230
*************9986 PP
== domain 3 score: 0.5 bits; conditional E-value: 0.042
DUF4200 6 remflvqealdakkeeierleellkereeelekkeqelkedlvkfdkflkeneakreraekkaeeet 72
e+ +v +l++++ + ++++e e+++k+e+ +++++++ +fl e+++ + ++ ee++
Q8CDN8 340 EELLQVFTELEEQNLTLVQYSQDVDENLEDVNKREKFIQDKINNNISFLLEHKHMLRMNCEREEEKA 406
578889999****************************************999988665555544443 PP
== domain 4 score: 2.7 bits; conditional E-value: 0.0083
DUF4200 25 leellkereeelekkeqelkedlvkfdkflkeneakreraek 66
+ +++ ++ee +++e el+ +l f +f + ++k + +
Q8CDN8 393 HMLRMNCEREEEKAAELELRSRLFSFGEFNSDAQEKLIDSLS 434
5667788888999*********************99987765 PP
== domain 5 score: 0.8 bits; conditional E-value: 0.033
DUF4200 59 akreraekkaeeetkekkekekeikklk.aeleel 92
++ ++a+++ +++++++k +e+++k+ + ++ e+l
Q8CDN8 478 REHVEAIERLKQKERRQKLREEKMKEKQrHQEERL 512
44444444443333333333333332220222222 PP
Or compare Q8CDN8 to CDD or PaperBLAST