PaperBLAST – Find papers about a protein or its homologs

 

Align Q8CI78 to PF02582 (DUF155)

Q8CI78 has 450 amino acids

Query:       DUF155  [M=173]
Accession:   PF02582.18
Description: RMND1/Sif2-Sif3/Mrx10, DUF155
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-56  176.4   1.6    4.2e-56  175.9   1.6    1.2  1  Q8CI78    


Domain annotation for each sequence (and alignments):
>> Q8CI78  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.9   1.6   4.2e-56   4.2e-56       1     173 []     227     404 ..     227     404 .. 0.98

  Alignments for each domain:
  == domain 1  score: 175.9 bits;  conditional E-value: 4.2e-56
  DUF155   1 vfvfryGvvVfwglteeeekeflkklkkfaeeeskseeeeeetEeleyvydekesrikndlivlesd.....sllaklaiShalaqSvkLsvlEesleklles 98 
             +f+fr+G+ Vfw+++e+  k++++ l+++++++++ ++ + e+Eel+y+++e +s+++++ i l+s+      +l+k+a+S+al+ SvkL+++E+ l+k++es
  Q8CI78 227 IFLFREGAAVFWNVKEKTMKHVMQVLERHETQPYEVALVHWENEELNYIKTEGQSKLHRGEIKLNSEldlddAILEKFAFSNALCLSVKLAIWEATLDKFIES 329
             7****************************9999999999999********9999**********9999*********************************** PP

  DUF155  99 tesipeeLaktgklklsrkellkkiGellklradlnlkselldtPdlfWeepeleklYealseyleikeRievLn 173
             ++sipe L+ ++k+kls+ke+++k+Gel+ lr+++nl+s++l tPd++W++++le+lY++++++l i +R++v+n
  Q8CI78 330 IQSIPEALKAGKKVKLSHKEVMQKMGELFALRHRINLSSDFLITPDFYWDRANLEELYDKTCQFLSITRRVKVMN 404
             **************************************************************************9 PP



Or compare Q8CI78 to CDD or PaperBLAST