Q8WU39 has 189 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-10 28.4 0.0 1.2e-09 24.9 0.0 2.2 1 Q8WU39
Domain annotation for each sequence (and alignments):
>> Q8WU39
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.9 0.0 1.2e-09 1.2e-09 1 150 [] 49 178 .. 49 178 .. 0.77
Alignments for each domain:
== domain 1 score: 24.9 bits; conditional E-value: 1.2e-09
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmld.Ynlhkekktskrtlkrlasrkgvkvelgikyelwde 101
+C+aC+a+a ++ ++l+k + k ++ ++g g+r + Sel +t++l+ C++ ++ Y +++ ++ ++ t l + g ++++ +
Q8WU39 49 RCDACRAVAYQMWQNLAKAETKLHTSNSG------GRR-------ELSELVYTDVLDRSCSRNWQdYGVREVDQVKRLTGPGLSE--G----PEPSISVMVT 131
6***************8888777776665......544.......57*************765554*******888875444433..3....3444444433 PP
DUF3456 102 dsaevnkslkkaCerlvEeyEdeieelykkeqee.edlekkLCserskeC 150
++l++ C + + e+ ++ ++y+ +q+ le LC +++C
Q8WU39 132 G-GPWPTRLSRTCLHYLGEFGED--QIYEAHQQGrGALEALLCGGPQGAC 178
4.55679************9888..788888888899******8877777 PP
Or compare Q8WU39 to CDD or PaperBLAST