Q96HH6 has 336 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.1e-84 266.8 3.3 9.1e-84 266.8 3.3 1.3 2 Q96HH6
Domain annotation for each sequence (and alignments):
>> Q96HH6
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.8 0.5 0.37 0.37 40 56 .. 25 41 .. 15 45 .. 0.50
2 ! 266.8 3.3 9.1e-84 9.1e-84 2 250 .. 60 321 .. 59 322 .. 0.92
Alignments for each domain:
== domain 1 score: -3.8 bits; conditional E-value: 0.37
DUF92 40 ffllllvFfllgsllTk 56
++++ l+F +++ ++
Q96HH6 25 IICISLAFWIISMTAST 41
34444555555555444 PP
== domain 2 score: 266.8 bits; conditional E-value: 9.1e-84
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyalle...... 98
+ +l++ +++kksl+ sGal +++vg+++++a+++ ff+ ll+Ffl++s+lTk+k e+K++++ + +++g+R++vqV++ng+v++ lally++ e
Q96HH6 60 VPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFS--FFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMI-Engpgei 159
67899999************************9777..9***********************99999999**********************865.55*9998 PP
DUF92 99 ...skellaelssllllgfvaslaaalaDTlaSElGkllsk.kprlittlkkvppGtnGgVsllGtlagllGalliallalllll...lak.......qlkli 187
+++ + ++s+++l ++a+la++++DT+aSE+G +lsk +prlitt++kvp GtnGgV+++G++++llG+++++++ ++l++ + q+++i
Q96HH6 160 pvdFSKQY--SASWMCLSLLAALACSAGDTWASEVGPVLSKsSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIA-YFLTQlifV-NdldisapQWPII 258
77755555..6899***************************************************************98.555553541.15567788***** PP
DUF92 188 llvtlaGllGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllg 250
+++ laGllGs++DS+lGAt+q++++d++tg vv+++++++r+i G +ldN+aVNl+s++l+
Q96HH6 259 AFGGLAGLLGSIVDSYLGATMQYTGLDESTGMVVNSPTNKARHIAGKPILDNNAVNLFSSVLI 321
***********************************************************9986 PP
Or compare Q96HH6 to CDD or PaperBLAST