Q96HH6 has 336 amino acids
Query: DUF92 [M=251]
Accession: PF01940.21
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-84 269.0 3.5 1.9e-84 269.0 3.5 1.3 2 Q96HH6
Domain annotation for each sequence (and alignments):
>> Q96HH6
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.9 0.4 0.38 0.38 40 55 .. 25 40 .. 15 45 .. 0.48
2 ! 269.0 3.5 1.9e-84 1.9e-84 2 250 .. 60 321 .. 59 322 .. 0.92
Alignments for each domain:
== domain 1 score: -3.9 bits; conditional E-value: 0.38
DUF92 40 ffllllvFfllgsllT 55
++++ l+F +++ ++
Q96HH6 25 IICISLAFWIISMTAS 40
3444455555554444 PP
== domain 2 score: 269.0 bits; conditional E-value: 1.9e-84
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKakaklaeekegaRgavqVlanglvalllallyallel..... 99
+ +l++ +++kksl+ sGal +++vg+++++a+++ ff+ ll+Ffl++s+lTk+k e+K++ + + +++g+R++vqV++ng+v++ lally+ +e+
Q96HH6 60 VPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFS--FFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYM-IENgpgei 159
67899999*************************777..9***********************99999999**********************85.55569999 PP
DUF92 100 ...skellalssllllgfvaslaaalaDTlaSElGkllsk.kprlittlkkvppGtnGgVsllGtlagllGalliallallllllak.........qlklill 189
+++ + ++s+++l ++a+la++++DT+aSE+G +lsk +prlitt++kvp GtnGgV+++G++++llG+++++++ ++l+ l+ q+++i++
Q96HH6 160 pvdFSKQY-SASWMCLSLLAALACSAGDTWASEVGPVLSKsSPRLITTWEKVPVGTNGGVTVVGLVSSLLGGTFVGIA-YFLTQLIFvndldisapQWPIIAF 260
88755555.689****************************************************************98.66665222345567789******* PP
DUF92 190 vtlaGllGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNnaVNllstllg 250
+ laGllGs++DS+lGAt+q++++d++tg vv+++++++r+i G +ldNnaVNl+s++l+
Q96HH6 261 GGLAGLLGSIVDSYLGATMQYTGLDESTGMVVNSPTNKARHIAGKPILDNNAVNLFSSVLI 321
*********************************************************9986 PP
Or compare Q96HH6 to CDD or PaperBLAST