PaperBLAST – Find papers about a protein or its homologs

 

Align Q9D1F0 to PF16297 (DUF4939)

Q9D1F0 has 113 amino acids

Query:       DUF4939  [M=112]
Accession:   PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      2e-56  175.0   0.1    2.3e-56  174.8   0.1    1.0  1  Q9D1F0    


Domain annotation for each sequence (and alignments):
>> Q9D1F0  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  174.8   0.1   2.3e-56   2.3e-56      16     112 .]      18     113 .]       5     113 .] 0.93

  Alignments for each domain:
  == domain 1  score: 174.8 bits;  conditional E-value: 2.3e-56
  DUF4939  16 lrkrrwrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyraflnemkeefGwedddedf 112
               r+rr rnpipfpelfdGe+++lpefivqt symlvd++tf++d+lkv+flitrlkGral+wv+pyi+ dsplln+y++flnemk++fGwe +dedf
   Q9D1F0  18 NRRRRRRNPIPFPELFDGEMDKLPEFIVQTGSYMLVDDRTFDTDELKVTFLITRLKGRALQWVIPYIKIDSPLLNDYNGFLNEMKRVFGWE-EDEDF 113
              367999*************************************************************************************.88886 PP



Or compare Q9D1F0 to CDD or PaperBLAST