PaperBLAST – Find papers about a protein or its homologs

 

Align Q9HW16 to PF10615 (DUF2470)

Q9HW16 has 244 amino acids

Query:       DUF2470  [M=77]
Accession:   PF10615.14
Description: Domain of unknown function (DUF2470)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-21   62.1   0.0    7.4e-21   60.9   0.0    1.7  1  Q9HW16    


Domain annotation for each sequence (and alignments):
>> Q9HW16  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.0   7.4e-21   7.4e-21       2      77 .]     161     230 ..     160     230 .. 0.92

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 7.4e-21
              HHHHHHHHHH-HHHHHHHHHHCST-TTCCEEEEEEE-SSEEEEEEC.....CEEEEEE-SS---SCCHHHHHHHHH CS
  DUF2470   2 ariiaHMNaDHadalllylrhyggvpdataarmtdidregmdlrvadgegkevevripFdpplkdaeearerlveM 77 
              +++++HMN+DHa a+++y++  g  p+++aa++ +id+eg++lr++     +  +++pF++++ +++++r++lv++
   Q9HW16 161 RGMVEHMNSDHAAAIAHYVELAG-LPAHAAAQLAGIDTEGFHLRIG-----QGLHWLPFPAACGNPGAVRQALVQL 230
              689******************96.9999****************44.....457********************96 PP



Or compare Q9HW16 to CDD or PaperBLAST