PaperBLAST – Find papers about a protein or its homologs

 

Align Q9HW29 to PF07433 (DUF1513)

Q9HW29 has 364 amino acids

Query:       DUF1513  [M=304]
Accession:   PF07433.15
Description: Protein of unknown function (DUF1513)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   3.6e-118  380.0   0.1   4.1e-118  379.9   0.1    1.0  1  Q9HW29    


Domain annotation for each sequence (and alignments):
>> Q9HW29  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  379.9   0.1  4.1e-118  4.1e-118       2     303 ..      60     363 ..      59     364 .] 0.96

  Alignments for each domain:
  == domain 1  score: 379.9 bits;  conditional E-value: 4.1e-118
  DUF1513   2 plpaRgHgvaahptreeavavaRrPGtfalvldlrageelatlaseedrhFyGHgvfsadGrlLyttEndl.etgrGvigvydaa.egyervgevstgGigp 101
               +++R+H++++hp+ + a++vaRrPGt ++++dl++g+ l+tl s++drhFyGHgvf++ G++Ly+tEnd+ ++grGv+gvy+++ e++++ ge+st+G gp
   Q9HW29  60 RVAQRCHDIVQHPSLPLALFVARRPGTESYLIDLNDGRLLQTLVSQKDRHFYGHGVFHQSGEWLYATENDTtDPGRGVLGVYRFDgERLQHSGEISTHGLGP 161
              689********************************************************************899***********99*************** PP

  DUF1513 102 HelllladgetLvvanGGietepesGraklnldtmqpsLayldaesGallekveLpeelrklSiRHlavaedgtvlfaqqyegdakeaapllalhrrgealk 203
              H++ +++dgetLvvanGGi+te+es r+++nld+m+psL+++ +++G+ll+k++L++  +++S+RHla+  dgt++++qq++gda+e+a lla++r+g++++
   Q9HW29 162 HQVSWMPDGETLVVANGGIRTEAES-RVEMNLDAMEPSLVLM-RRDGNLLSKETLAQ--QMNSVRHLAIGRDGTIVAGQQFMGDAHEHADLLAIKRPGRPFE 259
              *************************.****************.************77..556**************************************** PP

  DUF1513 204 aveaeeeelralagYvgsiavskegrlvavtsPrgnrvaiwdaasgalleeaalpdacgvaaakegflvssgqgk....vvevaeeeaklkklsgvawDnHl 301
              a+++ ee+  a+a+Y++s+a++++ rlva+t+Prgnr++iwd +sga++ +a+lpd++gv+a+k+gf+v+sgqg+     ++ ++  a+  +l++  wDnHl
   Q9HW29 260 AFPVAEEQRLAMAQYTASVAIHDDLRLVALTAPRGNRFFIWDLDSGAVRLDAPLPDCAGVGAVKNGFVVTSGQGRcrfyDCQGERIAAQPLELPSGLWDNHL 361
              **************************************************************************9775556666666666689********9 PP

  DUF1513 302 vr 303
              ++
   Q9HW29 362 HL 363
              85 PP



Or compare Q9HW29 to CDD or PaperBLAST