PaperBLAST – Find papers about a protein or its homologs

 

Align Q9WUH1 to PF08551 (DUF1751)

Q9WUH1 has 350 amino acids

Query:       DUF1751  [M=99]
Accession:   PF08551.14
Description: Eukaryotic integral membrane protein (DUF1751)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
      9e-33   99.2   3.8      9e-33   99.2   3.8    1.9  2  Q9WUH1    


Domain annotation for each sequence (and alignments):
>> Q9WUH1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.4      0.74      0.74      54      65 ..      23      34 ..      15      42 .. 0.46
   2 !   99.2   3.8     9e-33     9e-33       1      99 []      49     151 ..      49     151 .. 0.98

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.74
  DUF1751 54 vnvitnllvvll 65
             v+ ++ ++ +l+
   Q9WUH1 23 VKALCAVVLFLY 34
             333333333332 PP

  == domain 2  score: 99.2 bits;  conditional E-value: 9e-33
  DUF1751   1 Psallp...ypwtlltasfvelnvfkvlvslltLllggkylErlWgskEllkFilvvnvitnllvvlltlllylvtkseelll.vplsGligilvgflvalk 98 
              P++l+p   ++wtl t++++e++v++v++sl+t++++g++lE+lWg+ Ell+F+ vvnv+++ll +l++ll+y+++ + ++l+ ++++G+ g+l g+lvalk
   Q9WUH1  49 PGYLFPpnfWIWTLATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTYMASFNLVYLFtIRIHGALGFLGGVLVALK 150
              778887888**************************************************************************9****************** PP

  DUF1751  99 Q 99 
              Q
   Q9WUH1 151 Q 151
              9 PP



Or compare Q9WUH1 to CDD or PaperBLAST