R1GV87 has 854 amino acids
Query: DUF4965 [M=174]
Accession: PF16335.9
Description: Domain of unknown function (DUF4965)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-75 236.8 3.3 6e-75 236.8 3.3 2.0 2 R1GV87
Domain annotation for each sequence (and alignments):
>> R1GV87
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.7 0.4 0.11 0.11 122 164 .. 151 193 .. 146 201 .. 0.79
2 ! 236.8 3.3 6e-75 6e-75 3 174 .] 427 609 .. 425 609 .. 0.98
Alignments for each domain:
== domain 1 score: -1.7 bits; conditional E-value: 0.11
DUF4965 122 layaqasgdtsllkqyyelLkqwadYLvengldpanqlstddf 164
++y+++++ t+ +k y ++ ++w +Y ++++d + ++ ++ f
R1GV87 151 VSYQSTDNATHDVKLYTDVDSSWNNYAASSSVDYTFNVDSAAF 193
677888888899999999999*****99999887777766666 PP
== domain 2 score: 236.8 bits; conditional E-value: 6e-75
DUF4965 3 gekYadllalsvRqafaalelt...........gedntsdvllflKeissngnvntvdviypaaPlflylnpellkllLeplleyqesgrypkkyaahDlGt 93
++Y +++als+Rq++aa++lt + +++s++++f+Keissngn+ntvdv+ypa+P+fly+np+ll++ ++pl+ +qesg yp+ y++hDlG+
R1GV87 427 AQSYYAIVALSTRQIMAAYTLTvppdfacgnssSLYSSSEPFMFQKEISSNGNMNTVDVLYPAMPFFLYANPNLLRYAMNPLYLNQESGFYPRMYSMHDLGS 528
589**************************998668899**************************************************************** PP
DUF4965 94 sYPnatghndgedeqmpveesGnmlimalayaqasgdtsllkqyyelLkqwadYLvengldpanqlstddfagalanqtnL 174
+YPnatgh +g+deqmpveesGnml+m++ay++++gd+ +l+++y+ L qwa++L+e +l+p++qlstddf g+l+nqtnL
R1GV87 529 HYPNATGHVEGTDEQMPVEESGNMLLMTYAYYKFTGDSGYLRDHYTKLFQWAQFLIEYTLIPSTQLSTDDFLGTLENQTNL 609
********************************************************************************8 PP
Or compare R1GV87 to CDD or PaperBLAST