REBASE::Lsp6406VI has 1204 amino acids
Query: DUF559 [M=109]
Accession: PF04480.16
Description: Protein of unknown function (DUF559)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-39 120.4 0.7 3.3e-39 119.4 0.7 1.5 1 REBASE::Lsp6406VI
Domain annotation for each sequence (and alignments):
>> REBASE::Lsp6406VI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.4 0.7 3.3e-39 3.3e-39 4 108 .. 696 800 .. 693 801 .. 0.97
Alignments for each domain:
== domain 1 score: 119.4 bits; conditional E-value: 3.3e-39
DUF559 4 kanarklRreqteaekkLWrllrnrrlsglkfrRqkpigsYivDfvclkaklivelDGaqhdeeeeyDaeRtelLeslGftvlRfkndevlk 95
+ar+lR+ qt ae+ LW+ lr+rrl glkfrRq+ ig++i+Df+c +a l+ve+DG h+++ e+D+ R+e++ + Gf++lRfkn+ +l
REBASE::Lsp6406VI 696 LLKARELRKIQTPAEEILWQCLRSRRLGGLKFRRQHNIGQFIADFYCHEACLVVEVDGEVHNTQVERDQDRDEWMIANGFRILRFKNEAILD 787
568***************************************************************************************** PP
DUF559 96 nieevleeilkal 108
+ e+vl++il ++
REBASE::Lsp6406VI 788 DLETVLATILVTV 800
*********9876 PP
Or compare REBASE::Lsp6406VI to CDD or PaperBLAST