REBASE::M.Cla13003I has 475 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.1e-15 41.0 0.0 3.4e-14 39.1 0.0 1.9 2 REBASE::M.Cla13003I Domain annotation for each sequence (and alignments): >> REBASE::M.Cla13003I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.1 0.0 3.4e-14 3.4e-14 18 138 .. 155 264 .. 151 269 .. 0.88 2 ? -1.9 0.0 0.13 0.13 148 188 .. 295 336 .. 293 342 .. 0.80 Alignments for each domain: == domain 1 score: 39.1 bits; conditional E-value: 3.4e-14 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107 a+v + + + g ++ DP CG+G++l+Ea + k++ + e+ ++ l g D+ + v+ + N+ +g+ + REBASE::M.Cla13003I 155 KAIVSVMKPQIGMSINDPACGTGGFLLEAYEYMRASS-----------KDKTKLENLKTKALSGTDISPLVTSLCAMNLYLHDIGGDESP 233 689999999*******************988777777...........6677777778888************************99999 PP UPF0020 108 sqadaakLrlkegevdvivtnpPYGerlgsk 138 ++ L l ++ +d+++tnpP+G++ ++k REBASE::M.Cla13003I 234 VKTSDSLLSLGDQRYDMVLTNPPFGKKSSTK 264 9988888999999*************98776 PP == domain 2 score: -1.9 bits; conditional E-value: 0.13 UPF0020 148 flrelkrvlrgggrlvlltaenkalekaleer.alrkvkekn 188 fl+ + +vl+ gg++++++++n +e ++e+ + r k +n REBASE::M.Cla13003I 295 FLQHIMSVLKIGGKAAVVLPDNVLFEGGAGEKvRQRLLKDFN 336 889999999999**********99998888875555555555 PP
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