REBASE::M.Cst764I has 532 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-14 40.8 0.0 2.4e-14 39.6 0.0 1.6 1 REBASE::M.Cst764I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Cst764I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.6 0.0 2.4e-14 2.4e-14 20 181 .. 179 342 .. 172 356 .. 0.71
Alignments for each domain:
== domain 1 score: 39.6 bits; conditional E-value: 2.4e-14
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdliefsqa 110
+v l + +++++++DP CG+ ++l+ a + +re ++ e+++ ++ l g+D+d+ +v+ a N g +d
REBASE::M.Cst764I 179 IVALMEPTPQQRIIDPACGTAGFLVA-ANDWIALH---HREDLFN----KETRTTfTDEGLTGFDFDKTMVRIAAMNMFMHGFEDPNISHHD 262
788999*******************5.54444444...3444433....22233324445*************************9999999 PP
UPF0020 111 daakLrlkegevdvivtnpPYGerlgskkalekLYse.........flrelkrvlrgggrlvlltaenkalekaleeral 181
+kL+ + +++d++++npP+ +l++ kL s f +++ + l+ ggr++++++e + + +++al
REBASE::M.Cst764I 263 SLQKLPTTFEDFDLVLANPPFAGSLDKDAIDPKLKSVttakkteilFVHRFLQLLKPGGRAAVIVPEGVLFGSTKAHKAL 342
9*****9999***********99998765444444431111222224555556666666666666666666555555555 PP
Or compare REBASE::M.Cst764I to CDD or PaperBLAST