REBASE::M.DfeI has 493 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-14 38.1 0.0 1.3e-13 37.3 0.0 1.3 1 REBASE::M.DfeI
Domain annotation for each sequence (and alignments):
>> REBASE::M.DfeI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.3 0.0 1.3e-13 1.3e-13 29 134 .. 40 135 .. 36 156 .. 0.81
Alignments for each domain:
== domain 1 score: 37.3 bits; conditional E-value: 1.3e-13
UPF0020 29 gepllDPmCGsGtilIEaal.lganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaek..agvgdliefsqadaakLr..lk 118
++++lDP CG G +l+ a + +n +p + a++ ++l g D dr+++q++reN+ + a +g +i+++ + +L+ ++
REBASE::M.DfeI 40 EKRMLDPACGNGRFLVPMAEfIIRNTPPD--------------RVAERLQQLHGWDVDRKALQQCRENLDAlvAPLGLEIDWNLRKCDALKqwRS 120
7899************9886155556653..............33667788*****************987446788899999888888888889 PP
UPF0020 119 egevdvivtnpPYGer 134
++++d+i++npPY r
REBASE::M.DfeI 121 KDKFDLIIGNPPYI-R 135
99***********4.4 PP
Or compare REBASE::M.DfeI to CDD or PaperBLAST