REBASE::M.Fpr95bI has 499 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-13 36.7 0.0 3.1e-13 36.0 0.0 1.3 1 REBASE::M.Fpr95bI
Domain annotation for each sequence (and alignments):
>> REBASE::M.Fpr95bI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.0 0.0 3.1e-13 3.1e-13 18 136 .. 183 295 .. 178 359 .. 0.83
Alignments for each domain:
== domain 1 score: 36.0 bits; conditional E-value: 3.1e-13
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgd.liefs 108
+ +v l + ++++++ DP CG+ ++l+ a+ ++ +++v++ ++ +++ + + g+D+dr +++ + N gv++ +ie++
REBASE::M.Fpr95bI 183 RMMVDLMQPRADDVICDPACGTAGFLVAAGEYLRENR----KQEVFFDRK--NKDHYMNHMFHGFDMDRTMLRIGAMNMMTHGVDNpFIEYR 268
679**************************98877777....334444332..22333455599*********************98369999 PP
UPF0020 109 qadaakLrlkegevdvivtnpPYGerlg 136
+ + + +++ + +i++npP+ +l+
REBASE::M.Fpr95bI 269 DSLSDQNP-DKDRYSLILANPPFKGSLD 295
98888888.8889**********87776 PP
Or compare REBASE::M.Fpr95bI to CDD or PaperBLAST