REBASE::M.MfoCT6I has 506 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.2e-14 38.0 0.0 1.1e-13 37.4 0.0 1.3 1 REBASE::M.MfoCT6I
Domain annotation for each sequence (and alignments):
>> REBASE::M.MfoCT6I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.4 0.0 1.1e-13 1.1e-13 20 149 .. 191 314 .. 185 367 .. 0.83
Alignments for each domain:
== domain 1 score: 37.4 bits; conditional E-value: 1.1e-13
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl.iefsqa 110
+v+++ k+++ + DP CG+ ++l+ a +++ + l + a+++ ++ + g D+d+ +++ + N g++ i +++
REBASE::M.MfoCT6I 191 MVKMTAPKPTDEICDPACGTAGFLVAASEYVRSTHE-------SVLTDAAQRKHFHNSMFHGYDFDSTMLRIGSMNMLMHGIESPdIRYRDS 275
9************************77777766662.......2244445555558888***********************9854999999 PP
UPF0020 111 daakLrlkegevdvivtnpPYGerlgskkalekLYsefl 149
++ +++ +i++npP+ +l+ + + ++L + +
REBASE::M.MfoCT6I 276 LSEGASEDAEKYTLILANPPFAGSLDYESTSKDLQRVVK 314
9999999999****************9999999987654 PP
Or compare REBASE::M.MfoCT6I to CDD or PaperBLAST