REBASE::M.Pfe45I has 521 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8e-15 41.1 0.0 1.4e-14 40.4 0.0 1.3 1 REBASE::M.Pfe45I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Pfe45I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.4 0.0 1.4e-14 1.4e-14 22 144 .. 196 328 .. 190 335 .. 0.80
Alignments for each domain:
== domain 1 score: 40.4 bits; conditional E-value: 1.4e-14
UPF0020 22 rlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye.........lkaeaeeearaelk..lygsDldrrvvqgareNaekagvgd 103
+l + k g++++DP CG+G++l+ a + + ++++++ + + ++ + l+ lyg D+d +v+ + N+ gv+
REBASE::M.Pfe45I 196 ELVEPKLGNMIADPACGTGGFLLGAYQYMVTQLD-KNKKNIQPdedgfirnsVSGLLTKKVSDILNdsLYGYDIDVTMVRLGLMNLMMHGVDT 287
56788999***************99988888884.444444446899966653333333444444467***********************87 PP
UPF0020 104 .liefsqadaakLrlkegevdvivtnpPYGerlgskkalekL 144
i++++ + ++ +++++ +i +npP+ ++++ +e+L
REBASE::M.Pfe45I 288 pHIDYKDTLSKGFT-ESNQYQIIMANPPFTGSIDKGDINESL 328
369***********.5569**************998888776 PP
Or compare REBASE::M.Pfe45I to CDD or PaperBLAST