REBASE::M.PspGI has 433 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.4e-13 35.2 0.0 8.6e-10 24.7 0.0 2.4 2 REBASE::M.PspGI
Domain annotation for each sequence (and alignments):
>> REBASE::M.PspGI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.7 0.0 8.6e-10 8.6e-10 14 54 .. 50 89 .. 41 126 .. 0.78
2 ! 8.2 0.0 0.0001 0.0001 110 137 .. 245 273 .. 171 292 .. 0.69
Alignments for each domain:
== domain 1 score: 24.7 bits; conditional E-value: 8.6e-10
UPF0020 14 etLAaalvrlagwkdgepllDPmCGsGtilIEaallgania 54
+++A+ ++l g k+ +++lDP+CGsGt+l+Ea + n +
REBASE::M.PspGI 50 PQVARKSIKLWG-KNAKVILDPFCGSGTVLVEAKIKNINSY 89
555555555555.55689***************88877776 PP
== domain 2 score: 8.2 bits; conditional E-value: 0.0001
UPF0020 110 adaakLr.lkegevdvivtnpPYGerlgs 137
+ + L+ ++ + vd+i+t pPYG++ ++
REBASE::M.PspGI 245 MYHNVLEkADIEGVDLILTSPPYGDSKTT 273
3444455434457***********98554 PP
Or compare REBASE::M.PspGI to CDD or PaperBLAST