REBASE::M.Sru10036I has 490 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-13 37.5 0.0 2e-13 36.6 0.0 1.5 1 REBASE::M.Sru10036I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Sru10036I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.6 0.0 2e-13 2e-13 18 134 .. 172 279 .. 168 340 .. 0.75
Alignments for each domain:
== domain 1 score: 36.6 bits; conditional E-value: 2e-13
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107
+ +v++ + k ge+++DP CG+G++l a+ a+ ++ e ++ + ++ g+++++ + +N g++ +++
REBASE::M.Sru10036I 172 RFMVNRIDPKLGESIMDPACGTGGFL--ACAFDHVKAH---------YVNTTEDHKTLQRQIHGVEKKQLPHLLCTTNMLLHGIEVPVQI 250
679**********************9..4444444442.........23455555556777*******9999999999999999999999 PP
UPF0020 108 sqada..akLrlkegevdvivtnpPYGer 134
+ + + L +++vdvivtnpP+G
REBASE::M.Sru10036I 251 RHDNTlnKPLSSWDEQVDVIVTNPPFGGT 279
8866511456677779***********54 PP
Or compare REBASE::M.Sru10036I to CDD or PaperBLAST