REBASE::M.Sru9419I has 409 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-14 40.6 0.0 2.3e-14 39.6 0.0 1.5 1 REBASE::M.Sru9419I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Sru9419I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.6 0.0 2.3e-14 2.3e-14 18 134 .. 91 198 .. 87 261 .. 0.76
Alignments for each domain:
== domain 1 score: 39.6 bits; conditional E-value: 2.3e-14
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
+ +v++ + k ge+++DP CG+G++l a +++ + ++ e ++ + ++yg+++++ + +N g++ ++++
REBASE::M.Sru9419I 91 RFMVNRIDPKLGESIMDPACGTGGFLACAFDHVKEHY-----------VNTTEDHKTLQKQIYGVEKKQLPHLLCTTNMLLHGIEVPVQIR 170
679***********************55544444444...........2445555556667********9999999999999999999998 PP
UPF0020 109 qada..akLrlkegevdvivtnpPYGer 134
+ + L +++vdvivtnpP+G
REBASE::M.Sru9419I 171 HDNTlnKPLSSWDEQVDVIVTNPPFGGT 198
866511456677779***********54 PP
Or compare REBASE::M.Sru9419I to CDD or PaperBLAST