REBASE::M.SspRSPHI has 490 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-14 39.7 0.0 3.7e-14 39.0 0.0 1.3 1 REBASE::M.SspRSPHI Domain annotation for each sequence (and alignments): >> REBASE::M.SspRSPHI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.0 0.0 3.7e-14 3.7e-14 18 135 .. 155 263 .. 151 271 .. 0.82 Alignments for each domain: == domain 1 score: 39.0 bits; conditional E-value: 3.7e-14 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie.f 107 a+v++ + ++ e+ DP G+G++l+ a ++ ++ + ++a ++ +e kl g D+ ++vv+ + N+ g+g+ + + REBASE::M.SspRSPHI 155 DAIVEVMDPQPSETVHDPAAGTGGFLLSAYDHMRQQPA---------ATDRAVARRLRETKLSGNDIVPEVVRLCAMNLYLHGIGGDQSpV 236 5899***********************99866666663.........34566666668999***********************9766515 PP UPF0020 108 sqadaakLrlkegevdvivtnpPYGerl 135 + ada + g +dvi++npP+G+r REBASE::M.SspRSPHI 237 RHADALTAD-DGGRYDVILSNPPFGKRQ 263 555555444.667*************96 PP
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