SwissProt::A0A1C8HSP0 has 418 amino acids
Query: SU10_MCP [M=292]
Accession: PF17236.8
Description: SU10 major capsid protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-31 96.1 2.6 6.4e-31 94.0 2.6 1.8 1 SwissProt::A0A1C8HSP0
Domain annotation for each sequence (and alignments):
>> SwissProt::A0A1C8HSP0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 94.0 2.6 6.4e-31 6.4e-31 11 292 .] 14 405 .. 5 405 .. 0.85
Alignments for each domain:
== domain 1 score: 94.0 bits; conditional E-value: 6.4e-31
SU10_MCP 11 t.....edlsdeisnispedt.Pll...sligkgtkatstkheWqedelaapaad................................. 56
++++++i++ p+ Pll s +g+ t+a++++h ++++++ ++a+
SwissProt::A0A1C8HSP0 14 PqelnmKSFAGTILRRVPNGSaPLLamtSVVGS-TTAKASTHGYFSKTMVFASAVvtaeaaadatvltvensdgltkgmifyneatge 100
24456699*******999998899977556666.69*************9977778******************************** PP
SU10_MCP 57 ....................................naavEgadaptaeatprvrlsNytQIfkktvevSgtaqavkkagvgdelayq 108
+a +Eg++ pta++ ++v + N+tQIf++++ +++ta+a+ + + + +
SwissProt::A0A1C8HSP0 101 nmrlelvnglnltvkrqtgrisaaiiaantklivigTAFEEGSQRPTARSIQPVYVPNFTQIFRNAWALTDTARASYAEAGYSNITES 188
****************************************************************************766668999*** PP
SU10_MCP 109 vakklkelkrdiEkalingtkadgss..atarktgGllafittnvs.taatdgtagaltedllndllqkvyea....Ggn.pktllv. 187
+ + ++ + E a+++g++ g+ ++ ++t+G+ ++++ + + ++ + +a+t d+++d++ +++ G n ++++++
SwissProt::A0A1C8HSP0 189 RRDCMDFHATEQETAIFFGQAFMGTYngQPLHTTQGIVDAVRQYAPdNVNAMPNPTAVTYDDVVDATIDAFKWsvnvGDNtQRVMFCd 276
**********************55553379***********666644333333667**************998555554435****97 PP
SU10_MCP 188 ..gakqkraiskfagdaertrnvgktlgvsvdvyetdfGtlnvvlnrvmp.....adtilvldpeylklafl................ 252
g ++++ i f+g +++t++++ ++g+++++++ G+l + ++++ ++ ++v+d +kla++
SwissProt::A0A1C8HSP0 277 tvGMRTMQDIGRFFGEVTVTQRET-SYGMVFTEWKFFKGRLIIKEHPLFSaigisPGFAVVVDVPAVKLAYMdgrnakvenygqggge 363
777788888889999666666666.**********988***********7777779999***************77777777776555 PP
SU10_MCP 253 .rpffaeplaktG.daekgqivgEytLevrnekahgvitglt 292
++ +++ G da+ g ++ E++Le+ n++ ++vitgl+
SwissProt::A0A1C8HSP0 364 nKSGATDYSYGHGvDAQGGSLTSEWALELLNPQGCAVITGLQ 405
33333333337888999**********************985 PP
Or compare SwissProt::A0A1C8HSP0 to CDD or PaperBLAST