SwissProt::A2RVU1 has 175 amino acids
Query: DUF1218 [M=95]
Accession: PF06749.16
Description: Protein of unknown function (DUF1218)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-25 74.5 7.6 2.1e-24 72.1 5.0 2.2 2 SwissProt::A2RVU1
Domain annotation for each sequence (and alignments):
>> SwissProt::A2RVU1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 2.9 0.0 0.0082 0.0082 45 86 .. 3 55 .. 1 57 [. 0.69
2 ! 72.1 5.0 2.1e-24 2.1e-24 1 94 [. 58 147 .. 58 148 .. 0.86
Alignments for each domain:
== domain 1 score: 2.9 bits; conditional E-value: 0.0082
DUF1218 45 tfaiAealllaGaslnakhtken.hrq..........leesCytlkkgvFaaa 86
+f++++a ++ s++ ++ k ++q + esCy+ +++ F+ +
SwissProt::A2RVU1 3 IFLFGLAAFFLCLSAEFQKAKALlRAQvflkgkdlkwDGESCYLPENRAFGLG 55
56666666666666666666666556677777888888889999999999865 PP
== domain 2 score: 72.1 bits; conditional E-value: 2.1e-24
DUF1218 1 AavllllaqvianvvsgclccgkelspssakrtlavvffvlswitfaiAealllaGaslnakhtkenhrq..leesCytlkkgvFaaaails 90
A+v++ +aq+++nvv++ ++++++ ++++++++++sw+ fa+A++l+ +Gas+n+++ + + l+ +Cy++k+gvFaa+++ls
SwissProt::A2RVU1 58 ALVCVSVAQIVGNVVICRG---FTKTDKTRTTIFCIILLLFSWVNFAVAVTLISVGASMNREQI---YGKgwLNRECYLVKDGVFAASGFLS 143
89************76555...5555555677*****************************444...555689999**************** PP
DUF1218 91 lvta 94
+ t+
SwissProt::A2RVU1 144 VTTM 147
*998 PP
Or compare SwissProt::A2RVU1 to CDD or PaperBLAST