SwissProt::A3KNS2 has 276 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-46 145.0 3.6 1.2e-46 145.0 3.6 2.4 2 SwissProt::A3KNS2
Domain annotation for each sequence (and alignments):
>> SwissProt::A3KNS2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 145.0 3.6 1.2e-46 1.2e-46 1 146 [. 31 181 .. 31 190 .. 0.94
2 ? -3.6 7.0 0.71 0.71 22 50 .. 211 239 .. 200 253 .. 0.44
Alignments for each domain:
== domain 1 score: 145.0 bits; conditional E-value: 1.2e-46
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfr.ldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskr.......tlkrlas 84
kCe+Ck++ e+++a+++++++kev+ +++r ld kg iky kS++r++e+ e+vC+++ +Ynlhke+++s+r t+ +l++
SwissProt::A3KNS2 31 KCEVCKFVSIEMKSAFDETGKTKEVIDTNYRfLDDKG---APPIKYVKSDIRFIEVTENVCSRIMQYNLHKERDGSNRfakgmseTFSTLHN 119
8******************************777777...57*******************************************9999999 PP
DUF3456 85 r..kgvkvelgikyelwdedsaevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCser 146
+ kgvkv ++i+yelw+e+saev ++lkk+C+ +vE+yEd+ie++yk +qee dl+++LC+++
SwissProt::A3KNS2 120 LvnKGVKVVMDIPYELWNETSAEV-ADLKKQCDVMVEQYEDVIEDWYKGSQEE-DLTTYLCEKH 181
999*********************.************************9999.********98 PP
== domain 2 score: -3.6 bits; conditional E-value: 0.71
DUF3456 22 kkevdvggfrldkkgkrkkkkikyakSel 50
kk+ ++++ + ++g++k+kk+k++k
SwissProt::A3KNS2 211 KKKGKKKKGKDGEDGQKKEKKVKKKKKKS 239
22222222222333343444443333332 PP
Or compare SwissProt::A3KNS2 to CDD or PaperBLAST