SwissProt::B0FIH3 has 352 amino acids
Query: DUF5309 [M=283]
Accession: PF17236.6
Description: Family of unknown function (DUF5309)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-59 186.2 1.1 7.2e-59 185.4 1.1 1.4 1 SwissProt::B0FIH3
Domain annotation for each sequence (and alignments):
>> SwissProt::B0FIH3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.4 1.1 7.2e-59 7.2e-59 4 283 .] 21 343 .. 18 343 .. 0.89
Alignments for each domain:
== domain 1 score: 185.4 bits; conditional E-value: 7.2e-59
DUF5309 4 dvisriaptdTPllsligkekaksttveWqedeL.npdaanaqvEGdeatvkaesararlgNytqIfkksvsvSgTaeavnkaGrkdelayq 94
+ is+++p+dTP++s+ gke+ ++t++ Wq+d+L + d++na+vEG+ a+ + ++++ ++N+tqI++k+v+vS+Ta+++ + Gr el yq
SwissProt::B0FIH3 21 NWISVLSPQDTPFVSMTGKESINQTIFSWQTDALaSVDGNNAHVEGSRAEDGEMKPTVIKSNVTQILRKVVRVSDTANTTANYGRGRELMYQ 112
679********************************9******************************************************** PP
DUF5309 95 vakklkElkrdmEyalingnkasvsgskttarkmg...Gllawvksnnsvgtag......sgg............................. 148
++kk+kE+krd+E++l++g+ + ++++ ++ +++++ ++ ++t++ gg
SwissProt::B0FIH3 113 LEKKGKEIKRDLEKILLSGQARTDVLADQYLTNSAtdpAVVGLNDTHAARKTGAfqflcaHGGlaggvvdktkngpadpdtgavtvkvaqna 204
******************8776655555544444411234455555555555558888873337777***********************99 PP
DUF5309 149 atdGtqrafteallkdvlqklyqaGgneklvlvspelkevfstf...tarvevtaeakdnkigasvdvyesdfGk.vkivlnrvmparkvfv 236
+ t+ f+ea++ d+ +ly+aG + ++++++p+ ++f+ t + ++ +++++++ +v++++ + G+ +ki++nr+mp++ v++
SwissProt::B0FIH3 205 SNPTTNIGFDEADIFDMTLQLYTAGSEADIIMINPAHAKIFAGLqenTQGSRKRIFENTKQFIYEVNSITDPLGQsYKIIVNRWMPTDAVYF 296
89999**********************************9988877744444555899****************648*************** PP
DUF5309 237 idpaylklayLrpiqeeelaktGdsekgvvitEltLkvknekalavi 283
+ +a + +Lr ++ +elak G++ek +++ E++L+ +n++a++v+
SwissProt::B0FIH3 297 FRSADWTQMVLRAPKRTELAKDGSYEKWMIEMEVGLRHRNPYASGVL 343
********************************************986 PP
Or compare SwissProt::B0FIH3 to CDD or PaperBLAST