SwissProt::B0FIH3 has 352 amino acids
Query: SU10_MCP [M=292]
Accession: PF17236.8
Description: SU10 major capsid protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-81 258.8 1.8 6.4e-81 258.1 1.8 1.2 1 SwissProt::B0FIH3
Domain annotation for each sequence (and alignments):
>> SwissProt::B0FIH3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 258.1 1.8 6.4e-81 6.4e-81 7 289 .. 12 344 .. 6 347 .. 0.89
Alignments for each domain:
== domain 1 score: 258.1 bits; conditional E-value: 6.4e-81
SU10_MCP 7 ttfntedlsdeisnispedtPllsligkgtkatstkheWqedelaapaadnaavEgadaptaeatprvrlsNytQIfkktvevSgtaqavkk 98
+++++ +++++is +sp+dtP++s+ gk +++++t+++Wq+d+la+ + +na+vEg+ a++ e +p+v +sN+tQI +k v vS+ta+ +++
SwissProt::B0FIH3 12 QNGKKLSFANWISVLSPQDTPFVSMTGK-ESINQTIFSWQTDALASVDGNNAHVEGSRAEDGEMKPTVIKSNVTQILRKVVRVSDTANTTAN 102
5677799*********************.88***************8888****************************************** PP
SU10_MCP 99 agvgdelayqvakklkelkrdiEkalingtka..................dgss.a.tarktgGllafittnvs.................. 152
+g+g el yq++kk+ke+krd+Ek l++g++ +g + + arktg ++ ++ +
SwissProt::B0FIH3 103 YGRGRELMYQLEKKGKEIKRDLEKILLSGQARtdvladqyltnsatdpavVGLNdThAARKTGAFQFLC----Ahgglaggvvdktkngpad 190
********************************9988777776655544442222224677777776666....256689999********** PP
SU10_MCP 153 ............taatdgtagaltedllndllqkvyeaGgnpktllvgakqkraiskfagdaertrnvg....ktlgvsvdvyetdfG.tln 227
+a +++t+ ++e+++ d++ ++y+aG++++++++++++++ +++++ +++ +r++ k++ v+++ + G +++
SwissProt::B0FIH3 191 pdtgavtvkvaqNASNPTTNIGFDEADIFDMTLQLYTAGSEADIIMINPAHAKIFAGLQENTQGSRKRIfentKQFIYEVNSITDPLGqSYK 282
***********6555555555**************************************544444444455679****************** PP
SU10_MCP 228 vvlnrvmpadtilvldpeylklaflrpffaeplaktGdaekgqivgEytLevrnekahgvit 289
+++nr+mp+d+++++ ++++++++lr++++++lak+G++ek++i++E++L++rn++a+gv+
SwissProt::B0FIH3 283 IIVNRWMPTDAVYFFRSADWTQMVLRAPKRTELAKDGSYEKWMIEMEVGLRHRNPYASGVLF 344
***********************************************************985 PP
Or compare SwissProt::B0FIH3 to CDD or PaperBLAST