SwissProt::C0HJH8 has 376 amino acids
Query: DUF4043 [M=379]
Accession: PF13252.10
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-46 143.8 0.1 4e-46 143.6 0.1 1.0 1 SwissProt::C0HJH8
Domain annotation for each sequence (and alignments):
>> SwissProt::C0HJH8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.6 0.1 4e-46 4e-46 8 377 .. 18 376 .] 11 376 .] 0.88
Alignments for each domain:
== domain 1 score: 143.6 bits; conditional E-value: 4e-46
DUF4043 8 lavkkwssklfaealkrstierrlaggtsakmpiqritdlqkg.aGdevtfdLlnklngapitgdevaeGrgealsfssdklridqarkavd 98
++ + ws ++ +a + +i+ l gt+a+++iq+it+l ++ +G ++L++++ g+++ gd+++eG++eal+ +++dq+r+a +
SwissProt::C0HJH8 18 EQKTVWSLQFWRQARNAAFINMFL--GTDANSMIQQITELRRDeKGARAVITLIADMVGDGVVGDNQLEGNEEALTAFDTVIQLDQMRAANV 107
566778888888888888887777..**************98538*********************************************99 PP
DUF4043 99 agntmdqqrtpfdlreearaaladwldrlrdqsalvhlaGargfnsnwt.lasapkf.aatvvnavkAptsnrilvaggaasts......gs 182
++m qr+ +++r++ r+ la wl+ ++dq+a+ laG + ++ l + + f + t v+ p++nr l+ g ++ +
SwissProt::C0HJH8 108 HEGRMADQRSIVNFRTTSRDMLAYWLADRMDQLAFLSLAGVSYAYRTNGaLRGSSPFpNLTFAADVTPPSANRRLRWDGTNKVLvpnaatSD 199
999*************************************8755555246877777725678899***********9999887777776558 PP
DUF4043 183 lastDlltldlvdklrkladtmakparpvklegdkvaqgselyVlllhpeqysdlrtdtdtgawrdlqkaAaaralvdknPlFqgelGlyng 274
++++D+ + l+ +l++ a+t + ++g ++ +g+e+y ++l p +++l+ d + + + ++ r ++ nPlF+g++ +g
SwissProt::C0HJH8 200 VTAADTPSYALLVNLKAYAKT-----K--YIRGLRGDGGEEMYHVFLDPLAMAKLKLD---PDYIANLRSGYTR--GNVNPLFKGGIVTVDG 279
999999999999999999999.....3..35688899*********************...9999999988888..9*************** PP
DUF4043 275 vvlikaprvi..rfvnadsgkiaadtgasvaveralllGaQAlaiAfgkknggtpfrwseellDhgnrlevlaeailGlkKtrFnvddGdak 364
v+++ + v+ r+++ ++ +a + ++ ++ l++GaQAl +f++ + rw e+++D+ n+ +++ +ilG+ K +F + + d +
SwissProt::C0HJH8 280 LVIHEFRHVYntRGMAPGAKWGASGNVDGCSM---LFCGAQAL--GFADIGN---PRWVEKEFDYDNKHGISVAKILGFLKPQFPSIYEDGN 363
*****999953388999997677777777777...********..9998754...49****************************9988888 PP
DUF4043 365 stDfGviavdtaa 377
++DfGvi v+ aa
SwissProt::C0HJH8 364 TEDFGVINVYVAA 376
99*******9886 PP
Or compare SwissProt::C0HJH8 to CDD or PaperBLAST