SwissProt::C0HJH8 has 376 amino acids
Query: DUF4043 [M=376]
Accession: PF13252.11
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-43 133.1 0.2 7.4e-43 132.9 0.2 1.0 1 SwissProt::C0HJH8
Domain annotation for each sequence (and alignments):
>> SwissProt::C0HJH8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 132.9 0.2 7.4e-43 7.4e-43 2 374 .. 12 376 .] 11 376 .] 0.88
Alignments for each domain:
== domain 1 score: 132.9 bits; conditional E-value: 7.4e-43
DUF4043 2 tavgsalavkkqraglfaetlkrttalprlqtstnmpivrvndlqks.aGdevtfdLvnklagapitgnevaegrgealslssdelrinelr 92
+a + + + +++++ ++ ++ ++ l+t +n+ i+++++l ++ G ++L++++ g++++g++ +eg++eal+ + ++++++r
SwissProt::C0HJH8 12 FARLTNEQKTVWSLQFWRQARNAAFINMFLGTDANSMIQQITELRRDeKGARAVITLIADMVGDGVVGDNQLEGNEEALTAFDTVIQLDQMR 103
566667788999999999999999999999***************9846******************************************* PP
DUF4043 93 kavdaggtmdqqrspvdlralaraalkdyldkledqealvkmagarafssa.............kfnatvvnavkApssnrhfvaagaalts 171
a + g m qrs v++r+ r+ l+ +l+ ++dq a+ +ag+ ++ f+a v ps nr ++ g ++
SwissProt::C0HJH8 104 AANVHEGRMADQRSIVNFRTTSRDMLAYWLADRMDQLAFLSLAGVSYAYRTngalrgsspfpnlTFAA----DVTPPSANRRLRWDGTNKVL 191
9977777*************************************987777779******766555555....9****************999 PP
DUF4043 172 vgqatg.klastdlltldlldalrkvvdamalplrpvklegdkaaqddelyVlllhPaqysdlradgklrqlqknAiaratvdknPlFkgea 262
v +a+ +++ d ll +l++ +++ + + +g ++ +++e+y ++l P +++l+ d+ + + ++ r+ + nPlFkg++
SwissProt::C0HJH8 192 VPNAATsDVTAADTPSYALLVNLKAYAKT-----KYI--RGLRGDGGEEMYHVFLDPLAMAKLKLDPDYIANLRSGYTRG--NVNPLFKGGI 274
98776669*******************99.....333..5777999***********************99999999995..679******* PP
DUF4043 263 glyngvllikiprai..rfvnadsgkiaaatfsaasyavdrslllGaQAlakafgkkkngaipfiwseklldhgsrlevlaetidGlaktrf 352
+g+++ + +++ r+++ +a + ++ + l++GaQAl +f+ + +w ek++d+ ++ ++++ +i G k +f
SwissProt::C0HJH8 275 VTVDGLVIHEFRHVYntRGMAPGAKWGASGN--VDGCSM---LFCGAQAL--GFADI---G-NPRWVEKEFDYDNKHGISVAKILGFLKPQF 355
*********9988862255554444344444..677777...9*******..**999...3.34899************************* PP
DUF4043 353 nvddGggakptdfgviavdtav 374
++++ dfgvi v+ a+
SwissProt::C0HJH8 356 PSI-YEDGNTEDFGVINVYVAA 376
876.3677899*******9876 PP
Or compare SwissProt::C0HJH8 to CDD or PaperBLAST