PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::C4B4E5 to PF06722 (EryCIII-like_C)

SwissProt::C4B4E5 has 1475 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.8e-13   36.7   0.0    4.1e-13   35.6   0.0    1.5  1  SwissProt::C4B4E5  


Domain annotation for each sequence (and alignments):
>> SwissProt::C4B4E5  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.6   0.0   4.1e-13   4.1e-13      28      98 ..    1282    1352 ..    1271    1377 .. 0.91

  Alignments for each domain:
  == domain 1  score: 35.6 bits;  conditional E-value: 4.1e-13
     EryCIII-like_C   28 elpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskd 98  
                          +p+++ ++   P + l  + +a  HhgG+g+t ++l +G+P ++ p + d++  + rv ++G gi+l+k 
  SwissProt::C4B4E5 1282 VMPPEIHVIKSAPHDWLFSQIDAAAHHGGSGTTGASLRAGIPTIIRPFFGDQFFFGSRVEDIGVGICLKKW 1352
                         5799999999*********************************************************9975 PP



Or compare SwissProt::C4B4E5 to CDD or PaperBLAST