PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::D3Z1D3 to PF15232 (DUF4585)

SwissProt::D3Z1D3 has 1412 amino acids

Query:       DUF4585  [M=73]
Accession:   PF15232.10
Description: Domain of unknown function (DUF4585)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.4e-31   92.6   4.7    1.9e-30   91.1   4.7    1.9  1  SwissProt::D3Z1D3  


Domain annotation for each sequence (and alignments):
>> SwissProt::D3Z1D3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   91.1   4.7   1.9e-30   1.9e-30       1      73 []    1251    1322 ..    1251    1322 .. 0.97

  Alignments for each domain:
  == domain 1  score: 91.1 bits;  conditional E-value: 1.9e-30
            DUF4585    1 saaatqrklLlDpesGryyvvdlPlqvktktlfDpetGqYVevllpsaesevseaapvelllsplalgPgayp 73  
                         +++atq k+L+Dp+sG+y+v+d+Plqvk+kt++DpetG+YV+v++ps+e+ +se+   ++l++p+ l+Pg++p
  SwissProt::D3Z1D3 1251 PYPATQ-KVLQDPQSGQYFVFDVPLQVKIKTFYDPETGKYVKVSVPSSEEASSEPPLQDALAAPYLLYPGFRP 1322
                         689999.************************************************99*************986 PP



Or compare SwissProt::D3Z1D3 to CDD or PaperBLAST