SwissProt::E7FAW3 has 2801 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.5e-37 113.4 8.7 2.1e-35 108.5 1.6 3.3 3 SwissProt::E7FAW3
Domain annotation for each sequence (and alignments):
>> SwissProt::E7FAW3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.6 0.3 0.011 0.011 383 440 .. 267 324 .. 234 362 .. 0.89
2 ! 108.5 1.6 2.1e-35 2.1e-35 17 281 .. 914 1188 .. 910 1232 .. 0.89
3 ! 6.4 0.0 0.00018 0.00018 391 441 .. 1282 1329 .. 1254 1353 .. 0.82
Alignments for each domain:
== domain 1 score: 0.6 bits; conditional E-value: 0.011
DUF4704 383 ilkviakllsqskdses.ielrkkiLsdllvLlksnrenrrallqmsvWqewLvalakl 440
l v+++ll++s+ e+ +e+r L d +Ll+ nr +m W++ L++l++
SwissProt::E7FAW3 267 CLTVMIHLLHSSSVNERqVEIRSA-LDDYFQLLNWNRPPDSQQGDMHAWEDNLITLLEH 324
588999*****99999999**999.************99999999******99998865 PP
== domain 2 score: 108.5 bits; conditional E-value: 2.1e-35
DUF4704 17 lvvthsiqsilesvGGiqvLfPLfsqldqaeedeqlege...........................seadeklcatlleliaelleeset 79
vv ++++ l svGG+ L+PL++q+ ++ e + +e +++ +a l +i+++l+++++
SwissProt::E7FAW3 914 RVVNWDVKDVLSSVGGMGALLPLLEQVCLLDQRETVGQEtsdllgpeltssrgpagmllplgksseGRLEKNSVAAFLLMIKNMLRNHPA 1003
5788899*******************8777777665555667********************998856666777778889********** PP
DUF4704 80 nqqqllrlkGflvlsflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkki 169
nq+ ll+++G+++++ +L +v+++ + + vl a + llk++++ ++++Ll++l +++l+++++W +++++V +yL t +++ k
SwissProt::E7FAW3 1004 NQESLLQCHGPAIIGAMLGKVPSSMMDMSVLMACQFLLKQVSNE-GNNALLSQLYQYLLFDFRIWSRSHFAVCLGHVQYLTTVINEGK-- 1090
*****************************************885.8***********************************9999987.. PP
DUF4704 170 ltnlrrvstVlrlldilkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenve 259
+ rr +V+ +ld ++ Y ve+ + +p +e +++ l+sl++ l+++ +++e++++++y + vqd+++v+
SwissProt::E7FAW3 1091 -LKTRRKYGVQYILDSIRTHYSVEK-------------DGSPLSDERQTVQISLFSLLKDLLKSP---TAEELHSVLAYAAIVQDEQQVI 1163
.47899999*************983.............34677778889999*************...********************** PP
DUF4704 260 dvLelvirllseks...asfleald 281
vL+ + ++l +++ ++++ l
SwissProt::E7FAW3 1164 SVLDVLHTVLKSSPpprEQVVTVLL 1188
*******999888657766666554 PP
== domain 3 score: 6.4 bits; conditional E-value: 0.00018
DUF4704 391 lsqskdsesielrkkiLsdllvLlksnrenrrallqmsvWqewLvalakla 441
ls+ d ++ r +i+ +l L++sn+e ++ l +s+Wq+ L++l +
SwissProt::E7FAW3 1282 LSHRADLSA---RLEIVRKLFCLIHSNEEYVKQLAHQSGWQDVLTKLYVKE 1329
566666555...999*****************************9875433 PP
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