SwissProt::O34968 has 331 amino acids
Query: DUF3048_C [M=114]
Accession: PF17479.6
Description: Protein of unknown function (DUF3048) C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-32 96.9 0.3 5.2e-32 96.9 0.3 1.6 2 SwissProt::O34968
Domain annotation for each sequence (and alignments):
>> SwissProt::O34968
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.1 0.48 0.48 11 23 .. 164 179 .. 158 196 .. 0.49
2 ! 96.9 0.3 5.2e-32 5.2e-32 4 114 .] 206 314 .. 203 314 .. 0.92
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.48
DUF3048_C 11 vtftY...daedglYl 23
++++Y ae++ Y+
SwissProt::O34968 164 TSYDYikkAAEQKGYK 179
3444411122333333 PP
== domain 2 score: 96.9 bits; conditional E-value: 5.2e-32
DUF3048_C 4 kyssnke...vtftYdaedglYlryqdgephvdaetgeqlaakNvivleveehkvkddaggrleidltgsgkgylltnGkvieitWkkesed 92
+y +n+ v+++Yd++ + Y+r++dg ++d+etg+++a++N++++e+ +h+++d++g r++idl+++gkg+l+++G+vie Wk+ +
SwissProt::O34968 206 DYGTNNVtnlVEYNYDKKAEFYTRSSDGVITTDRETGKPVAMQNIFIVEA-SHHIIDQDG-RRDIDLESGGKGLLFQHGNVIETDWKQ--VN 293
55444433479***************************************.88889*999.***************************..99 PP
DUF3048_C 93 gptkyydadGkeiklnpGktwi 114
g++++++ dGk +++ pGktwi
SwissProt::O34968 294 GRIVPVK-DGKWLPFVPGKTWI 314
******5.*************9 PP
Or compare SwissProt::O34968 to CDD or PaperBLAST