SwissProt::P27603 has 365 amino acids
Query: CM_2 [M=79]
Accession: PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.5e-24 70.5 0.6 1.7e-23 69.2 0.4 1.8 2 SwissProt::P27603
Domain annotation for each sequence (and alignments):
>> SwissProt::P27603
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 69.2 0.4 1.7e-23 1.7e-23 1 79 [] 11 93 .. 11 93 .. 0.90
2 ? -3.8 0.0 0.96 0.96 62 72 .. 126 136 .. 123 140 .. 0.67
Alignments for each domain:
== domain 1 score: 69.2 bits; conditional E-value: 1.7e-23
CM_2 1 RkeIdeiDrelleLlaeRmelakeiaeyK.....kenglpvldpeReeevlerlre...gaeelgldpeavekifreiisesralQk 79
R +Id++D+++l+L++eR+++a+e+a++K k+++ +++peRe+ vl++++e g+ ld+e ++++frei+s ++al++
SwissProt::P27603 11 RVRIDSLDERILDLISERARCAQEVARVKtaswpKAEEAVFYRPEREAWVLKHIMElnkGP----LDNEEMARLFREIMSSCLALEQ 93
889**************************66655555555****************76666....*******************996 PP
== domain 2 score: -3.8 bits; conditional E-value: 0.96
CM_2 62 avekifreiis 72
a+ ++fre+++
SwissProt::P27603 126 AIDEVFREVVA 136
56777777765 PP
Or compare SwissProt::P27603 to CDD or PaperBLAST