SwissProt::P85987 has 306 amino acids
Query: SU10_MCP [M=292]
Accession: PF17236.8
Description: SU10 major capsid protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-73 231.8 0.1 7.8e-73 231.5 0.1 1.0 1 SwissProt::P85987
Domain annotation for each sequence (and alignments):
>> SwissProt::P85987
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 231.5 0.1 7.8e-73 7.8e-73 5 290 .. 7 291 .. 2 293 .. 0.92
Alignments for each domain:
== domain 1 score: 231.5 bits; conditional E-value: 7.8e-73
SU10_MCP 5 tgttfntedlsdeisnispedtPllsligkgtkatstkheWqedelaapaadnaavEgadaptaeatprvrlsNytQIfkktvevSgtaqav 96
++ + +ed++d++snispe tPl+s+i k ++ +t+++Wq d l++ ++ n++ E +da++ e tp++ ++Ny+QI++k v vS++a+av
SwissProt::P85987 7 YTMAGIKEDFADWVSNISPEYTPLISMIRK-FPVHNTMFQWQWDVLKDVDTENQHNEASDAKDVELTPTTVVQNYVQIMRKVVFVSDSANAV 97
3345666***********************.89***************7777**************************************** PP
SU10_MCP 97 kkagvgdelayqvakklkelkrdiEkalingtka.dgss.atarktgGllafittnvstaatdgtagaltedllndllqkvyeaGgnpktll 186
+++g+++el yq++k++kelkrd E ++ +a d++s +++r t+ + ++i +a +++++l+e++l +++ k+y++G++p+ ++
SwissProt::P85987 98 SSHGREKELFYQLKKAAKELKRDNEGIFLLKDRAgDAGSaTKPRLTASFGSLI------DASMKKTADLDEATLFEMTAKLYTEGADPTLIM 183
**********************************9555558************......444446789************************ PP
SU10_MCP 187 vgakqkraiskfa..gdaertrnvg.ktlgvsvdvyetdfG.tlnvvlnrvmpadtilvldpeylklaflrpffaeplaktGdaekgqivgE 274
++++++ +++++ + ++++ +++ k+++ +v++++ + G +l+ ++nr+ p+d+ ++++p++l +a+lr++++ lak+G+aek++i+ E
SwissProt::P85987 184 YHPSNANFFASLQekSGTRMRIFENdKRFVKQVEYIVDPLGqELKCIPNRWCPEDATYIFNPSDLGMAVLRAPKKVALAKSGSAEKYMIEQE 275
*************6434555555558****************************************************************** PP
SU10_MCP 275 ytLevrnekahgvitg 290
++ +++n+ka ++i g
SwissProt::P85987 276 VGFRLNNPKAAALIIG 291
************9976 PP
Or compare SwissProt::P85987 to CDD or PaperBLAST