SwissProt::P85987 has 306 amino acids
Query: DUF5309 [M=283]
Accession: PF17236.6
Description: Family of unknown function (DUF5309)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-59 185.8 0.0 6.2e-59 185.6 0.0 1.0 1 SwissProt::P85987
Domain annotation for each sequence (and alignments):
>> SwissProt::P85987
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.6 0.0 6.2e-59 6.2e-59 1 283 [] 15 289 .. 15 289 .. 0.96
Alignments for each domain:
== domain 1 score: 185.6 bits; conditional E-value: 6.2e-59
DUF5309 1 dLsdvisriaptdTPllsligkekaksttveWqedeL.npdaanaqvEGdeatvkaesararlgNytqIfkksvsvSgTaeavnkaGrkdel 91
d +d +s+i+p+ TPl+s+i k + +t ++Wq d L + d++n + E+++a+ + ++++ + Ny qI++k+v vS++a+av++ Gr++el
SwissProt::P85987 15 DFADWVSNISPEYTPLISMIRKFPVHNTMFQWQWDVLkDVDTENQHNEASDAKDVELTPTTVVQNYVQIMRKVVFVSDSANAVSSHGREKEL 106
67899*************************************************************************************** PP
DUF5309 92 ayqvakklkElkrdmEyalingnkasvsgskttarkmgGllawvksnnsvgtagsggatdGtqrafteallkdvlqklyqaGgneklvlvsp 183
yq+ k++kElkrd E +++ + a ++gs+t++r +++ +++++ +++++ ++ea+l ++ kly++G+ ++l++ p
SwissProt::P85987 107 FYQLKKAAKELKRDNEGIFLLKDRAGDAGSATKPRLTASFGSLIDASMKKTAD------------LDEATLFEMTAKLYTEGADPTLIMYHP 186
*******************999*************************998866............*************************** PP
DUF5309 184 elkevfstf..tarvevtaeakdnkigasvdvyesdfG.kvkivlnrvmparkvfvidpaylklayLrpiqeeelaktGdsekgvvitEltL 272
++ + f++ + + ++ ++d++++ +v+ ++ + G ++k ++nr++p++ ++++p+ l +a+Lr +++ lak+G++ek+++++E++
SwissProt::P85987 187 SNANFFASLqeKSGTRMRIFENDKRFVKQVEYIVDPLGqELKCIPNRWCPEDATYIFNPSDLGMAVLRAPKKVALAKSGSAEKYMIEQEVGF 278
****998887744555556789****************559*************************************************** PP
DUF5309 273 kvknekalavi 283
+++n+ka+a+i
SwissProt::P85987 279 RLNNPKAAALI 289
********987 PP
Or compare SwissProt::P85987 to CDD or PaperBLAST